Veillonella rodentium: 44547418_00735
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Entry
44547418_00735 CDS
T05216
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vrm
Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vrm03009
]
44547418_00735 (rlmCD)
Enzymes [BR:
vrm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
44547418_00735 (rlmCD)
Ribosome biogenesis [BR:
vrm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
44547418_00735 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
PrmA
MTS
Methyltransf_11
Methyltransf_15
PCMT
Ubie_methyltran
UPF0020
Methyltransf_32
N6_N4_Mtase
RrnaAD
Methyltransf_4
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
SNV62252
UniProt:
A0A239YTY8
LinkDB
All DBs
Position
1:822968..824449
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AA seq
493 aa
AA seq
DB search
MRDRNHISRKSTKRGNKYNQGQRQKSQDILKLSKKQKAVTSAPVKVGDTVLVSIHGIGSS
GEGVGRVEDFTVFVPFALPNETVKVTITTVKKTYATGKLLEVITAADNRIAPNCELYGVC
GGCQLQHITYEGQLSLKTQKVKDVIERIGHQNPDLVKPALGPKNPWAYRNKMQMPVGGTR
ETIRMGFYAMGSHDIVHGTNCPIQMDGNNQIAQACYEIAEELGIEPYGEHTGKGVLRHII
GRIGQSGYMVIFVTATDYLPDQDQWIERLTKRVPSVETIVHNVNRKRTNVILGPTNHVLY
GDGTITDHIKDLRFTLSPHSFFQVNPEQTTVLYDQALMYANLKGHETVIDAYCGTGTISL
FLAREVKYVIGIEIVEPAIIDARENARRNGYENTEFIVADAAVEMPKLYKAGVRPDVIVF
DPIRAGCKEEVLTSAAGMEPKRIVYVSCNPATMARDIEILTHYGYELKEVQPVDMFPMTA
HVETVVLMSRVRD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagggacagaaatcatatatctcgtaaatccacgaagcgtggaaacaaatataatcaa
gggcagcgtcagaaatctcaggatatattaaaactctctaaaaaacagaaggctgttacg
tcggctcccgttaaggtcggtgatactgtactcgtatcaattcacggcatcggcagcagc
ggtgaaggcgtaggtcgtgttgaggactttaccgtttttgtaccatttgctttgccgaat
gagactgtgaaagtaactataacaacggtgaaaaagacatatgctacgggtaagctttta
gaggtcataaccgcagcggataatcggattgcgccgaactgcgaattatacggcgtttgc
ggcggctgtcaattacagcacataacctacgagggacagctttcgctaaaaacacaaaaa
gtgaaggatgttattgaacgaatcggacatcagaatccggatcttgtaaaacccgcattg
ggaccgaagaacccgtgggcctatcggaataagatgcaaatgcctgtaggaggcacacga
gaaacgatacggatgggtttctatgccatggggtctcacgatatcgttcacggcacaaac
tgccctatacagatggacggaaataatcagattgctcaagcatgctatgaaattgcggag
gaacttggtatagaaccgtatggcgaacatacgggtaagggtgtattacgccatatcatc
ggtcgtatcggtcaatccggatatatggttatctttgtaacggcaactgattatttgccg
gatcaggaccaatggattgagaggctgacaaagcgggtgccatcagtggaaaccatcgtt
cataatgtgaacagaaagcggacaaatgttatattagggcctacgaatcatgtgctttac
ggggacggtacgattacggatcacattaaggatttgcgatttaccttgtcaccgcattcc
ttctttcaggttaatccggaacagacgacggtattatacgatcaagcgttaatgtatgcg
aatttaaaaggtcatgagactgtcattgatgcctattgcggtacggggactatctcgttg
tttcttgcgcgcgaggtgaagtatgttatcggcatagagattgtagagccggccattatc
gacgctcgtgaaaatgcgcgacgcaatggttatgaaaatacggaatttatcgtcgctgat
gcggccgtggaaatgccgaaattatataaagccggtgtacgaccggatgttatcgtattc
gacccgatccgtgcaggctgtaaagaagaggtacttacctccgcagcgggcatggaaccg
aaacgcatcgtttatgtatcctgtaatcctgctaccatggctcgagacattgaaattctc
acacactacggctatgaactgaaagaagtgcagccggtggacatgtttcctatgactgcg
cacgttgagacggtagtattgatgtcaagggtcagggactaa
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