Veillonella rodentium: 44547418_00761
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Entry
44547418_00761 CDS
T05216
Symbol
cfiB
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
vrm
Veillonella rodentium
Pathway
vrm00020
Citrate cycle (TCA cycle)
vrm00620
Pyruvate metabolism
vrm00720
Other carbon fixation pathways
vrm01100
Metabolic pathways
vrm01120
Microbial metabolism in diverse environments
vrm01200
Carbon metabolism
vrm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
44547418_00761 (cfiB)
00620 Pyruvate metabolism
44547418_00761 (cfiB)
09102 Energy metabolism
00720 Other carbon fixation pathways
44547418_00761 (cfiB)
Enzymes [BR:
vrm01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
44547418_00761 (cfiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
HMGL-like
ATP-grasp
HlyD_D23
HlyD_3
ATP-grasp_3
ATP-grasp_4
GCV_H
NQRA_N
Cas6b_N
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
SNV62630
UniProt:
A0A239YV49
LinkDB
All DBs
Position
1:845944..849390
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AA seq
1148 aa
AA seq
DB search
MKKIKSVLVANRGEIAIRVFRACNEMGIKTVAIYSKEDTLSLHRNQADEAYLVGEGKKPV
DAYLDIEDIIRIAKEHDIDAIHPGYGFLSENEGFARRCEEEGIIFIGPKIEHLHMFGDKV
NAREQAKLAEIPMIPGSDGALKDFAQLEEFADTHGFPLMIKAVNGGGGRGMREVHRKEDL
LDAYDRAKSEAKAAFGDDDVYVEKLIVEPKHIEVQILGDEHGNVVHLHERDCSVQRRHQK
VVEMAPAFALPLETRKAVCDAAVKIMKNVHYVNAGTVEFLVTADGSFYFIEVNPRIQVEH
TVTEMVTDIDIVHSQIRIAEGYSLHSPEVGIPEQDKIPCKGTAIQCRITTENPKNNFMPD
TGKILAYRSSGGFGIRLDSGNAFTGAVVTPYYDSLLVKATAFGPNNDETIRKMLRCLKEF
RIRGVKTNIHFLINVLENPEFQSGQYNVNFIEEHPELFELKPDRDRGTKLLRYIADVTIN
GYSGAGHQEVPDFDPIQMPSALDISPAAGTKQTFDKLGPDKFSKWLSEQKQVFFTDTTWR
DAHQSLFATRLRTIDMARVAGHAAKGVPNLFSLECWGGATFDVSYRFLHEDPWERLRMFR
REVPNTLLQMLLRGANAVGYTSYPDNVVRQFIQRAAVNGIDVFRVFDSLNSLDNMHVAID
EVRAQNKIAEVALCYTGDILDGKRTKYNLDYYVNMAKELEKAGANIIAIKDMAGLLKPQA
SYNLVSALKDAVSVPIHLHTHEGSGNSIYTYGRAVDAGVDVIDLAYSAFANGTSQPSMNS
MYYALAGHERQPEMNIDYMEEMSHYFGSIRPYYRGVDKAEAYPNTEVYQHEMPGGQYSNL
QQQAKMVGLGDRWTDIKKMYHQVNMMFGDIIKVTPSSKVVGDMTLYMVQNNLTEKDIFEK
GELLDFPQSVVEFFEGRLGTPYQGFPEKLQKIILKGARPITVRPGAVLPPTDFEHVRNEL
SDMGAQTTDEDVSAYCLYPKVYQDYNKFVSDFGDVSVLDTPTFFFGMKRGEEIQVTIEKG
KTLIIRMNGYSEPDEDGNRIVLFEFNGQSRSIKVHDKHAKTTGVVRRKADESNPGEIGAT
LSGSVVKILVKNGQSVTKGEPLIVTEAMKMETTITAPIDGIVEEVLVREGSRIESGDCLL
RIEDALKR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcaaatccgttttggttgccaaccgtggtgaaattgcaattcgcgtattt
cgcgcatgtaacgaaatgggtattaaaacagtagccatttactctaaagaggataccttg
tccttgcatcgtaatcaagctgatgaagcctacctcgtaggggaaggtaagaaacctgtt
gatgcatatcttgatattgaagatatcatccgtattgcaaaagaacatgacatcgacgcc
attcatccgggctatggattcttatccgaaaatgaaggtttcgcccgtcgatgcgaagaa
gaagggattatctttatcggacctaaaattgaacatcttcatatgttcggtgataaggtt
aatgctcgtgaacaggcgaaattggctgaaatccctatgattccggggtctgatggagcg
cttaaagattttgctcaattggaagaatttgccgatactcatggcttcccgttgatgatt
aaagccgtcaacggcggcggcggccgcggtatgcgtgaagttcatcgtaaggaagatctt
ctcgatgcgtatgatcgcgctaagtctgaagcgaaagccgctttcggtgatgacgatgta
tatgtggaaaaactcatcgtagaacctaaacacattgaagtacaaattctgggtgatgaa
cacggtaatgtggttcatctccatgaacgtgactgctccgtgcaacgccgtcatcaaaag
gtcgttgaaatggcgcctgcctttgcgttaccgttggaaacgcgcaaagctgtatgtgat
gcagccgttaagatcatgaagaatgttcactacgtcaatgctggtacagttgagtttttg
gtaacagcggacggcagtttctacttcatcgaagttaaccctcgtattcaggtggaacat
actgtaacggaaatggttacggatattgatattgtacattctcagatccgcattgctgaa
ggctacagcttacatagtcctgaggtgggaatccctgaacaggataaaattccttgtaaa
ggaacggctattcaatgtcgtattaccactgaaaatccgaaaaataacttcatgcccgat
acgggtaaaatccttgcataccgtagttccggcggtttcggtatccgccttgactcggga
aatgctttcacgggtgctgtcgtaacaccgtattatgattccttgcttgtgaaagcgacc
gcattcggtcctaataatgacgaaacaattcgcaaaatgttgcgctgtttaaaggaattc
cgtattcggggcgtaaaaactaatattcatttcttgatcaatgtattggaaaatcccgaa
ttccaaagtgggcaatacaatgtaaacttcattgaagaacatcctgaattgtttgaattg
aaaccggatcgtgaccgcggtacaaaattattgcgttacattgcggatgtgacgattaac
ggctattccggtgccggtcatcaggaagttcctgactttgatccgattcagatgccatct
gcgttggatataagccctgcggctggaacaaaacagactttcgataaattaggtccggat
aaattctccaaatggttgagcgaacaaaaacaagtattctttacggatactacatggcgt
gatgcccatcaatccttatttgcgactcgcctacgcaccatcgatatggcacgtgtagcc
ggccatgctgcaaaaggtgttcctaacttattttctcttgaatgttggggcggtgctacc
tttgatgtatcctatcgtttcttgcatgaagatccatgggaacggttgcgtatgttccgt
cgcgaagtaccgaatacattgttgcaaatgttgcttcgcggtgctaatgcggtaggttat
acttcatatccggataatgtggtacgtcagtttattcaacgtgccgctgtaaacggtatc
gatgtattccgcgtatttgacagcttgaacagcttggataatatgcatgtagctatcgat
gaagttcgtgctcagaataaaatagccgaagtggctctatgctatacgggcgatattttg
gacggaaaacgtacaaaatacaatttggactattatgtgaacatggcgaaagaacttgaa
aaagcaggggcgaatattatcgccatcaaagatatggcggggctcttgaaaccgcaggcg
tcttataatttggtatccgccttaaaagatgcggtatctgttcctattcatttgcataca
catgaaggctccggcaactccatttatacatatggccgagcagtagatgccggtgtggac
gttatcgatttggcgtactccgcgtttgctaacggtacaagtcagccgagcatgaattcc
atgtactatgcgttggcaggtcatgaacgtcagcctgaaatgaatatcgattacatggag
gaaatgtcccattacttcggcagtattcgaccttactatagaggtgtcgataaagccgaa
gcatatcctaatacagaggtatatcaacatgaaatgccgggcggacaatactccaacttg
cagcaacaggcaaagatggtaggtcttggcgaccgttggacggatatcaagaaaatgtac
catcaggtcaatatgatgttcggagatatcattaaagtaacgccgtcttccaaggttgta
ggggatatgacattgtatatggtacaaaacaacttgacggaaaaggatatcttcgaaaaa
ggagagcttcttgatttccctcaatccgtagtggaattctttgaaggtcgcctcggcaca
ccgtaccagggattccctgaaaagttacagaagatcatcttgaaaggagcacgccctata
accgttcgcccgggtgccgtattgcctccgaccgattttgaacatgtacgcaatgaattg
agcgatatgggtgcgcaaaccactgatgaagatgtaagtgcatattgcctatatcctaag
gtttatcaggattacaataaatttgtaagtgatttcggcgatgtgtccgtacttgatacg
ccgacattcttcttcggtatgaagcgcggcgaagaaattcaggtaaccattgaaaagggt
aagacccttattatcagaatgaacggttattccgaacctgatgaggatggcaatcgcatt
gtactgtttgagtttaacggtcaatcgcgtagcattaaggtgcatgataaacatgcaaaa
accaccggtgttgttcgtcgtaaagcggatgaatcgaaccctggtgaaatcggagccaca
ttatccggatctgttgtcaagattctcgttaagaatggtcagtccgtaacgaagggtgaa
ccgttaatcgtaacggaagctatgaagatggaaacgacgattacggctccaatcgacggt
attgtcgaagaggttctcgttcgagaaggcagccgtattgaatccggtgactgcttgctc
cgtatcgaggatgctttaaaacgataa
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