Veillonella rodentium: 44547418_00816
Help
Entry
44547418_00816 CDS
T05216
Symbol
dxs_3
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
vrm
Veillonella rodentium
Pathway
vrm00030
Pentose phosphate pathway
vrm00710
Carbon fixation by Calvin cycle
vrm01100
Metabolic pathways
vrm01110
Biosynthesis of secondary metabolites
vrm01120
Microbial metabolism in diverse environments
vrm01200
Carbon metabolism
vrm01230
Biosynthesis of amino acids
Module
vrm_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
44547418_00816 (dxs_3)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
44547418_00816 (dxs_3)
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
44547418_00816 (dxs_3)
Enzymes [BR:
vrm01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
44547418_00816 (dxs_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Transketolase_C_1
PFOR_II
PhoD_2
Motif
Other DBs
NCBI-ProteinID:
SNV63344
UniProt:
A0A239YYL8
LinkDB
All DBs
Position
1:906553..907485
Genome browser
AA seq
310 aa
AA seq
DB search
MGKATREAYGNALARIGKANQNIIVLDADLSKSTKTDTFKTACPERFFNVGIAEQNLISV
GAGLAAAGKIPFVSSFAMFATGRAFEQIRNAVCYPKLNVKVCATHAGITVGEDGATHQSL
EDISCMRTLPNMTVVVPADERETKSVIEWAAAYEGPVYVRLGRAGVEDVTAEGYTFEPGR
SAMLADGFDVTIIACGALVGPALEAVKILGQSNVSARVINMASIKPIDADAIVKAAAETG
AIVTAEEHNIIGGLGSAVAEVVVANNPVPMEFVGVQDTFGESGTPKELMVKYGLSADDIV
AAAKRVIARK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagcaacacgtgaagcatatggcaatgcactggctcgcattggcaaagccaat
cagaatattatcgttttagatgcggatttatctaaatctaccaagaccgatacatttaaa
acggcatgccctgaacgtttcttcaatgtgggaattgcggaacagaacttgatttccgtc
ggtgccggattggctgcggcaggaaagattccgtttgtatcttcctttgctatgtttgcg
acgggacgtgcgtttgagcagattcgaaacgctgtatgttatccgaaactcaatgtgaaa
gtatgtgccactcatgcgggaattaccgttggtgaagacggggcgactcatcagagttta
gaagatatttcctgtatgcgtacattgcctaatatgacagttgtcgttccggctgatgaa
cgggaaacgaaatctgttattgaatgggctgcggcttatgaaggacctgtatatgttcgc
ttgggtcgtgccggtgtagaggatgtaacggcggaagggtatacatttgaaccgggtaga
tctgcaatgttggctgatggattcgacgtaactatcatcgcatgcggcgctttagtcgga
cctgcacttgaggcggttaaaatattaggtcagtccaatgtatcggctcgtgttatcaat
atggcatctattaaacctatcgatgctgatgctattgtaaaagcagctgctgaaaccggt
gctatcgtgactgcggaagagcataatatcatcggtggcctcggttctgccgtggcggaa
gttgtagtggctaataatccggtacctatggaattcgtcggtgttcaagatacgtttggg
gagagcgggacaccaaaagaattgatggtaaaatacggtttgtccgcagatgatattgtg
gcagcagcaaaacgtgtaatcgctcgtaagtaa
DBGET
integrated database retrieval system
