Veillonella rodentium: 44547418_00862
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Entry
44547418_00862 CDS
T05216
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vrm
Veillonella rodentium
Pathway
vrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
44547418_00862 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_00862 (priA)
Enzymes [BR:
vrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
44547418_00862 (priA)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
44547418_00862 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
AAA_19
Zn_ribbon_6
Zn_ribbon_ISL3
SLFN-g3_helicase
Bac_DnaA
IBR_1
Motif
Other DBs
NCBI-ProteinID:
SNV63922
UniProt:
A0A239YYN6
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All DBs
Position
1:945184..947367
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AA seq
727 aa
AA seq
DB search
MRVAQIIINRPAKQLHKPLSYLMPKKFGTVLPGTRVLVPLGNSREEGILIGYTELTESPE
FTLRNIVQILDSEPWFTPEMMDTARRLNEYYLCSYGDALRLFTVHKTLKSYEAPKEEWLV
VTPDFSVDQFSGRKRKQRELAAYLLEVGGASKALLLAKGYSRMVIKQVSEAHGIVVESRF
KATKTVFDELLTEEYKIPLSEAQQKAYESIQYAMDHHVYQPFLLHGVTGSGKTQIYLRAT
ARCISQDKTAIILVPEIILTDQIVRRFVETFGDEVVVFHSKLTVQQRNNNWERLRRKDSH
IIIGARSAIFAPAEDIGLIVVDEEHDTSYKQEDMVRYHARNVALWRGEAHGCPVILGSAT
PSVVSYHKAQNGTYRLLELPNRIFEQPMPSVSIVDMKEEMLHGNYSVFSDAMMHLIQRTL
DEHNQMIILLNRRGYSTFVMCRDCGETIMCPHCDVAMVYHQAGEELRCHYCEHHEPIPAV
CPKCKSKRIKFFGSGTQKVEEELRAHFQHARIARLDQDVTKHKQAAEDILHDFGNHKYDI
LLGTQMVSKGHDFKGVTAVGILTADSVLNIPVYSASERTFDLLTQTSGRAGRGDKTGHVV
IQTYNPLNYAIIKSKTHDYVGFYHEEIQNREALGYPPFRQMIHMVVRHQDMNTLESVANC
IVNDLERHKGNLDITINGPYETSIKKVRDMYRLAIMIRGTDLTDMKKYIYHSWIFTQEGL
LIDVDPV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgcacagattattattaatcgaccggctaaacaactacataaaccgttaagc
tatttaatgccgaaaaaattcggtactgttttacccggtacacgtgtattggttcctctt
ggtaatagtcgagaggaaggaatccttatcgggtataccgaattaacggagtctcccgag
tttacattgcgtaatatagtgcagattttagatagtgaaccgtggtttacaccggaaatg
atggatacggcaagacgactaaatgaatattatctttgctcctatggtgatgcattacgt
ctttttacggttcataaaacgttaaagtcctatgaagctccgaaagaggaatggcttgta
gtcactccggatttttctgttgatcaatttagcggacgtaaaagaaaacaacgtgaactg
gctgcctatttgcttgaggttgggggtgcttccaaggctttattattggctaaaggttat
tcccgtatggttatcaagcaggtaagcgaagctcatggtatcgttgtagaatcccgattc
aaagctacaaaaacggttttcgatgagttattgacggaggaatataaaattcccttatca
gaggcgcaacagaaggcttatgagtcaattcaatatgctatggatcatcatgtttatcag
ccatttttacttcatggagttacggggagcggcaagacacagatttatttgcgagctacc
gctcgctgcatcagtcaggataaaaccgctatcattttggtgccggaaattattttaact
gatcagattgttcgtcgttttgtggaaacctttggggatgaagtcgttgtttttcatagt
aaactaactgtgcagcagcgcaataacaattgggaacgattgcgtcgtaaagatagtcat
atcattatcggcgctcggtccgcaatatttgcaccggccgaagatatcggtctcatcgtt
gtcgatgaagagcatgatacatcttataagcaggaagatatggtgcgttatcatgcaaga
aatgttgcattatggcgtggtgaagcacatggatgtccggtgattctcgggtctgcaaca
ccttctgtagtatcctatcacaaggcacaaaacggtacatatcggttattggagttaccg
aaccgtatttttgaacaaccgatgccttccgtatcgattgtggatatgaaagaagaaatg
ttgcacggtaattattctgtattttccgatgccatgatgcatcttattcaacgtacattg
gatgagcataatcagatgattatacttttgaatcgtcgcggttacagcacatttgttatg
tgtcgtgattgtggggagacgattatgtgtcctcactgtgatgtggctatggtatatcat
caggccggtgaggagttacgttgtcattattgtgaacatcatgaaccgattcctgctgtt
tgtccaaaatgtaaaagtaagcgtatcaagtttttcggatccggcacacaaaaggtagag
gaagaactgagagcccactttcaacatgcccgcatcgcaaggctggatcaggatgtaacg
aagcataagcaagcagcggaggatatacttcacgatttcggtaatcataaatatgatatt
ttattgggtactcaaatggtatctaaagggcatgattttaagggtgtaactgccgttggc
attttgacggcggattcagttttaaatatacccgtttattccgcatcggagcgaacgttt
gatttattgacacaaacgtcaggacgagctggtcgtggagataaaactggtcatgtcgtt
atacaaacatataatcctttaaattatgctataataaagagtaagactcatgattatgta
ggcttttatcatgaagaaatacagaatcgtgaagcccttggttatccaccgttccgtcaa
atgattcatatggtcgtacgtcatcaggatatgaatacgctggaatctgttgctaattgc
atagtaaatgatttggaacgtcataagggaaatctggatataacaattaacggaccttat
gaaacaagtatcaaaaaggttcgtgatatgtaccgtttagcgattatgattcgcggtact
gatttgactgatatgaagaaatatatatatcactcgtggatttttacgcaagaaggatta
cttatcgatgtagatcctgtgtag
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integrated database retrieval system
