Veillonella rodentium: 44547418_01046
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Entry
44547418_01046 CDS
T05216
Symbol
groL
Name
(GenBank) Stress protein H5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vrm
Veillonella rodentium
Pathway
vrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
44547418_01046 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vrm03019
]
44547418_01046 (groL)
03110 Chaperones and folding catalysts [BR:
vrm03110
]
44547418_01046 (groL)
03029 Mitochondrial biogenesis [BR:
vrm03029
]
44547418_01046 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vrm04147
]
44547418_01046 (groL)
Enzymes [BR:
vrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
44547418_01046 (groL)
Messenger RNA biogenesis [BR:
vrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
44547418_01046 (groL)
Chaperones and folding catalysts [BR:
vrm03110
]
Heat shock proteins
HSP60 / Chaperonin
44547418_01046 (groL)
Mitochondrial biogenesis [BR:
vrm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
44547418_01046 (groL)
Exosome [BR:
vrm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
44547418_01046 (groL)
Exosomal proteins of other body fluids (saliva and urine)
44547418_01046 (groL)
Exosomal proteins of breast cancer cells
44547418_01046 (groL)
Exosomal proteins of colorectal cancer cells
44547418_01046 (groL)
Exosomal proteins of bladder cancer cells
44547418_01046 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF3618
Motif
Other DBs
NCBI-ProteinID:
SNV66350
UniProt:
A0A239Z5W9
LinkDB
All DBs
Position
1:complement(1140736..1142361)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEILFNEEARRALGRGVDQLADAVKVTLGPKGRNVVLDKKFGSPTITNDGVTIARDIE
LPDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIQEGMRNVAAGANPMILKKGIE
TAVKTLVDEIKKRSIKVSGKAEIAQVASVSAADEEIGGLIAEAMEKVGNDGVITVEESKG
LQTALNVVEGMQFDRGYISPYMVTDPDRMEAVMDNPYILITDRKIGAIADMLPTLEKVVK
VGKELLIIAEDVEGEALATLVVNRLRGTFKAVAVKAPGFGDRRKAMLEDIAILTGGTVIT
EDMGRKLDSVELEDLGTARQVRISKDETTIIDGVGDKNAIAQRVSQIRAQLEETTSEFDR
EKLQERLAKLSGGVAVIEVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTTFIDI
IPALNTLEATGDVQTGINLVKRAVEEPVRQIAYNAGLEGSVVVEKVKNTDAGIGFNALTE
EYVDMVKSGIVDPAKVTRSALQNAASIASLVLTTETIVADKVDENAAAPAMPPMGGMGGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatcttgtttaacgaagaagctcgtcgcgctttaggccgcggcgttgat
caattggcggatgctgtaaaagttacattgggacctaaaggccgtaatgtggtattagat
aaaaaattcggttctcccacaattacaaatgacggtgtaacgattgcccgcgatattgag
ctaccggatccatttgaaaatatgggggctcaactggtaaaagaagttgctaccaaaact
aatgatgtagcaggtgacggtactacgactgccactgtattggctcaagctatgattcaa
gaaggtatgcgtaacgtagcagccggtgctaatccgatgattttgaaaaaaggtattgaa
accgctgtaaaaacattggtagatgaaatcaaaaaacgttccattaaagtttccggaaaa
gcggaaatcgctcaagtcgcaagcgtatccgcggcagatgaagaaatcggcggtctgatt
gcggaagcaatggaaaaagtcggcaacgacggcgttattactgttgaagaatccaaaggt
ttacaaacggcattaaatgtagtagaaggtatgcaatttgaccgtggctacatttctcca
tacatggtaaccgatcctgatcgtatggaagctgttatggataatccgtatatcttgatt
acggaccgtaagatcggcgctattgcggatatgttaccaacacttgaaaaagtggtaaaa
gtaggtaaagaacttcttatcatcgctgaagatgtagaaggtgaagcattggctacattg
gtagtaaacagattgcgtggtacatttaaagcggtagctgttaaggcgcctggctttggc
gaccgtcgtaaagctatgcttgaagatatcgctatcttaacaggtggtactgtaatcact
gaagacatgggtcgtaaacttgactctgtagagcttgaagaccttggtacagcccgtcag
gttcgcatcagtaaagatgaaacaacgattatcgatggcgtaggtgataagaatgcaatc
gctcaacgtgttagtcaaatccgtgcacaactggaagaaacgacttccgaatttgaccgt
gaaaaattgcaagaacgtcttgctaaattatccggcggtgtggctgttattgaagtaggt
gccgctacagaagttgaaatgaaagataaaaaacttcgcatcgaagatgcattgaatgct
acacgtgccgctgttgaagaaggtatcgtagccggtggtggtactacattcatcgatatc
atccctgcattgaatacattggaagcgacaggtgatgttcagaccggtattaaccttgta
aaacgtgctgtagaggaacctgttcgccaaatcgcatacaatgcaggccttgaaggctcc
gttgttgttgaaaaggttaaaaatacagatgctggtatcggctttaatgcattgactgaa
gaatatgtagatatggtaaaatcaggtatcgtcgatcctgcgaaggtaacacgttccgca
cttcaaaatgccgcatctatcgcatcgttagttttgactacagaaactattgttgctgat
aaggtagatgaaaatgctgcagcacctgcaatgcctcctatgggtggtatgggcggtatg
atgtaa
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