Veillonella rodentium: 44547418_01180
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Entry
44547418_01180 CDS
T05216
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vrm
Veillonella rodentium
Pathway
vrm00470
D-Amino acid metabolism
vrm00550
Peptidoglycan biosynthesis
vrm01100
Metabolic pathways
vrm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
44547418_01180 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
44547418_01180 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
44547418_01180 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vrm01011
]
44547418_01180 (ddlB)
Enzymes [BR:
vrm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
44547418_01180 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vrm01011
]
Precursor biosynthesis
Amino acid ligase
44547418_01180 (ddlB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
GARS_A
ATP-grasp
ATP-grasp_4
CPSase_L_D2
RimK
ATP-grasp_3
ATPgrasp_YheCD
ATPgrasp_ST
R2K_2
Motif
Other DBs
NCBI-ProteinID:
SNV68298
UniProt:
A0A239ZC76
LinkDB
All DBs
Position
1:complement(1260425..1261357)
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AA seq
310 aa
AA seq
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MKDKQIIVLMGGPSKEADVSRRTGAAIAEALVSKGYKAKTLELNPRTLLQDIESLGGEIV
FNAIHGRYGEDGALQGLLEMAEIPYTGSGIMAHAVGMNKKVSKDVFKGAGIPTAAFESYN
GNIESDKAIIQHIRETFTIPVVVKSATQGSSIGVTIVRDETQLADAVTEALKYDPILVVE
QFLDGREFTVSILDGQALPVIEIRPHSGEYDYESKYTAGATDYLVPAPISDDMTAAMQSI
GERVYREVQGSGAIRVDIMTDHDDNLYVLEYNTIPGMTATSLVPKAAKEMGMDFPTLCEK
ILLTAGLGKF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaacaaataatcgtattgatgggcggaccttcaaaggaagcggatgtgtcc
agacgtacaggtgccgctattgcagaggctcttgttagtaaaggatataaagctaaaaca
ttggaattgaacccgcgtacattgttacaagacattgagtcattaggcggtgaaatcgta
tttaatgcgattcatggtcgttacggtgaggatggagctttacaggggttattggaaatg
gctgaaatcccgtataccggatccggcattatggctcatgcggtggggatgaataaaaaa
gtcagcaaggatgtatttaaaggggccggtattccgaccgcggctttcgaatcgtataat
ggtaatattgagtcagataaagccattattcaacatattcgtgagactttcaccatcccc
gtagtagtaaaatctgcaacgcaaggttcaagtatcggtgttaccattgttcgtgatgaa
actcagttggcggatgccgtaacggaagcccttaagtatgacccaattctcgtggtagaa
cagttcctggacggacgtgaatttaccgtttccatcctggatggtcaagctttaccggtc
attgaaattcgtccgcattccggtgaatatgattatgaaagtaagtatacggccggcgct
acagattatctcgtacctgcaccgatcagcgatgatatgacggctgcgatgcagagtatt
ggggaacgagtatatcgggaagtacaaggaagcggtgccatccgtgttgatatcatgacg
gatcatgatgataatttgtatgttttggaatacaatacgataccgggaatgacggcgaca
tccctggtaccaaaagcggctaaagaaatgggaatggattttcccacattatgtgaaaag
attctgctaacggccggtttggggaaattttaa
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