Veillonella rodentium: 44547418_01183
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Entry
44547418_01183 CDS
T05216
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vrm
Veillonella rodentium
Pathway
vrm00470
D-Amino acid metabolism
vrm00550
Peptidoglycan biosynthesis
vrm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
44547418_01183 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
44547418_01183 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vrm01011
]
44547418_01183 (murD)
Enzymes [BR:
vrm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
44547418_01183 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vrm01011
]
Precursor biosynthesis
Amino acid ligase
44547418_01183 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Mur_ligase
AlaDh_PNT_C
GIDA
Pyr_redox_2
FAD_oxidored
Nitroreductase
Pyr_redox
DAO
NAD_binding_8
HI0933_like
CbiA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
SNV68334
UniProt:
A0A239ZC82
LinkDB
All DBs
Position
1:complement(1263860..1265230)
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AA seq
456 aa
AA seq
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MEYGDKQILVLGAGASGIGASWVLARLGAHVVLNDYKPVALPRHDEERLVAAGVIIITGH
QDESLLDGVDVIVISPGISLDIPIVKAAKKRHIDVVSEVEVAYEVSKSPIVAVTGTNGKT
TTTTLLTKVLEKTGQPVKVGGNIGDSLSEVAYSMPAGGYLVAELSSYQLETVKHFRPLGA
IVLNITPDHLARHKTMEKYIAAKERIFENQISSDFLVLNVDDPVVADMAERASSHILEIS
QQKPVRNGAYYADGRCYVVSDGTPVAVIGTEDIHIPGSHNIENILAVIALTYALGMSADS
ICGVVSNFHGVEHRLERVKTISGVTFYNDSKATNVDSVVKALESFDQPVILLAGGHDKMT
PLEDFMELVKKRTKSVIFMGAAAERFEAAAKDAGVEHIYRADSMKDAVRQAYGLAGDGDI
VLLSPACASFDWYSCFEERGDDFKRCVQMLEEGGHH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaatatggagataaacagatacttgtgctcggtgccggcgccagcggtataggcgct
tcctgggtactggctcggctaggtgctcatgtggtattgaatgattataagccggttgca
ctgccgcgacatgatgaagagcgtttggttgctgccggtgtcattattattacggggcat
caagatgaatctctcctcgacggagtggatgttatcgttatatctccgggaatttccttg
gacattcccattgtgaaagcggcgaaaaagcgtcacatcgatgtggtaagcgaggttgaa
gtcgcttatgaagtttccaaatcacctattgtagctgtaacaggtacgaacggtaagacg
acgaccactacattattgacgaaggtgcttgagaaaacggggcaacccgtaaaggtgggc
ggaaatatcggtgactctctcagtgaagtggcctactctatgccggctggcggttatttg
gtggcggaattatccagttatcaattggaaacagttaagcacttcagaccgttaggagct
attgtgctcaacattacaccggatcatttggctcgtcataagacgatggaaaaatacatc
gccgcaaaggagcgcatttttgaaaatcaaatcagttccgattttctcgtgctgaatgta
gatgatcccgttgtagctgatatggctgaacgagcatcgagtcatattcttgaaatcagc
caacaaaagcctgttagaaatggcgcgtattacgctgatggccgttgttacgttgtatcg
gatggtaccccggtggcggtaataggtacagaggatatccatattcccgggagccataat
attgaaaacattttggccgttatcgctttaacatatgcgttgggtatgtctgcagatagt
atttgtggtgttgtcagcaattttcatggcgtggagcatcgcctggaacgcgtgaaaacc
atttccggcgtgactttttataatgactcaaaagcgaccaatgtagattctgttgtgaag
gcgttagaatcttttgatcaacctgtgatcttactggccggtggtcatgataaaatgaca
ccgttagaggattttatggagctcgttaagaagcggacaaagtccgttattttcatgggg
gcagcggcggaacgttttgaagcggccgctaaagatgccggtgtggagcatatttatcgt
gcagattccatgaaagatgcggtacgtcaggcctatggattggcgggtgacggcgatatc
gtgttactatcaccggcgtgtgccagttttgattggtatagctgttttgaagagcgtgga
gacgattttaaaaggtgtgttcagatgttggaagagggaggacaccattaa
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