Veillonella rodentium: 44547418_01322
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Entry
44547418_01322 CDS
T05216
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
vrm
Veillonella rodentium
Pathway
vrm00362
Benzoate degradation
vrm00620
Pyruvate metabolism
vrm00650
Butanoate metabolism
vrm01100
Metabolic pathways
vrm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
44547418_01322 (gcdB)
00650 Butanoate metabolism
44547418_01322 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
44547418_01322 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vrm02000
]
44547418_01322 (gcdB)
Enzymes [BR:
vrm01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
44547418_01322 (gcdB)
Transporters [BR:
vrm02000
]
Other transporters
Primary active transporters [TC:
3
]
44547418_01322 (gcdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
SNV69895
UniProt:
A0A239ZFC6
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All DBs
Position
1:complement(1412425..1413546)
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AA seq
373 aa
AA seq
DB search
MEAFAVAIQSVINDSGFLAFTTGNAIMILVGLILLYLAFAKEFEPLLLGPIAFGCLLANI
PHNGFEEGVMALISAGISQEIFPPLIFLGVGAMTDFGPLIANPKTLLLGAAAQIGVFAAL
GGAMALGFTVQEAAAIGIIGGADGPTSIYLAAKLAPHLLGAIAVAAYSYMSLVPLIQPPV
MKLFTTKKEREIVMEQLREVTRFEKIVFPIVATIFISLLLPSITSLLGMLMLGNLFRESG
VTDRLSDTSQNALINTVTIFLATGTGLTMSAEHFLSWGTIKIILLGLFAFICGTAGGVLF
GKLMSLVDGGKTNPLIGSAGVSAVPMAARVSQVVGAKANPANFLLMHAMGPNVAGVIGTA
VAAGTMLAMLSTR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttttgctgttgcgatacaatccgttattaacgatagcggtttcctcgcattt
acaacaggcaatgctataatgattcttgtaggattaatactattatatttagcatttgca
aaagagtttgaaccattattgttgggtccgattgcttttggttgtttgctcgcaaacatt
cctcataacggttttgaagaaggcgttatggcacttatcagtgcgggtatttcccaagaa
atcttcccaccactaattttccttggcgtaggtgccatgactgacttcggtccgcttatt
gcgaaccctaagacattgttattaggtgctgccgcacaaatcggtgtatttgcagctctt
ggtggtgcaatggctttgggctttactgtacaagaagctgccgctatcggtatcatcggt
ggcgcggacggccctacatccatctatttggcggctaaattagctccacatttattaggt
gctatcgcggttgccgcatattcctatatgtccttggtaccgttgattcaacctccggta
atgaagttattcactactaaaaaagaacgtgaaattgtgatggaacaattgcgtgaagta
acacgttttgaaaaaatcgtattcccaattgttgcaacgattttcatttccttattgctt
ccttccattacatccttgttaggtatgttgatgttaggtaacttgttccgtgaatccggt
gtaacggatcgcttatccgatacatctcaaaatgcgttaatcaataccgttaccattttc
ttggcaacaggtactggtttaacgatgagtgcggaacacttcttaagctggggcactatt
aaaatcatccttttaggcttatttgcatttatttgcggtacagccggcggtgtattattt
ggtaaattgatgagcttagtcgatggcggtaaaacaaatccacttattggttctgccggt
gtatccgcggttccaatggcggctcgcgtatcccaagtagttggtgctaaagctaatcct
gcaaacttcttgctcatgcatgctatgggaccgaacgtagcaggtgttatcggtacagct
gtagcggcaggtacaatgcttgctatgttgtccactcgttaa
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