Veillonella rodentium: 44547418_01439
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Entry
44547418_01439 CDS
T05216
Symbol
hupA
Name
(GenBank) HB
KO
K03530
DNA-binding protein HU-beta
Organism
vrm
Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vrm03032
]
44547418_01439 (hupA)
03036 Chromosome and associated proteins [BR:
vrm03036
]
44547418_01439 (hupA)
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_01439 (hupA)
DNA replication proteins [BR:
vrm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
44547418_01439 (hupA)
Chromosome and associated proteins [BR:
vrm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
44547418_01439 (hupA)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
44547418_01439 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HTH_78
Motif
Other DBs
NCBI-ProteinID:
SNV71453
UniProt:
A0A239ZKQ0
LinkDB
All DBs
Position
1:complement(1541398..1541697)
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AA seq
99 aa
AA seq
DB search
MNKTELIASVAQKTELTKKDAEKAVKAVFDTVAEELAAGGKVQVIGFGTFEVRERAAREG
RNPQNGKTIRIAASKSPAFKAGKGLKEQVNAAKAKKRKK
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagaattaatcgcaagtgttgcacaaaaaactgagttaacaaaaaaagac
gctgaaaaagcagttaaagctgtattcgatacagttgctgaagaattagctgctggtggt
aaagtacaagttatcggcttcggtactttcgaagttcgtgaacgcgcagctcgtgaaggc
cgcaacccacaaaacggcaaaactatccgtatcgcagcttccaaatctcctgcattcaaa
gctggtaaaggtttgaaagaacaagttaacgctgcaaaagctaaaaaacgcaaaaaataa
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