Veillonella rodentium: 44547418_01466
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Entry
44547418_01466 CDS
T05216
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vrm
Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_01466 (sbcC)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
44547418_01466 (sbcC)
Archaeal homologous recombinant proteins
44547418_01466 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
DUF7491
Tim44
nSTAND3
AAA_21
AAA_16
ABC_tran
TMF_TATA_bd
AAA_15
Motif
Other DBs
NCBI-ProteinID:
SNV71700
UniProt:
A0A239ZLL9
LinkDB
All DBs
Position
1:complement(1567178..1570261)
Genome browser
AA seq
1027 aa
AA seq
DB search
MKPISLTMQAFGPYRDTISLDFNALEGHSMFLISGPTGAGKTSILDAIVYALYGEPSGEV
RKTDAIRSDFAEPHTMTCVEFTFAIGAKKYRIERLPKQLVAKKRGTGMREQNASATVYAM
KDGEWQVIATSAAAVRESVQSIIGFRKDQFLQVVLLPQGEFRKLLVASTGEREEILHTLF
RTELYRRLQDALKEAYESSKQGIEENLTKQQIVLQSIPHEEDTPILTIEHVRQLLASRVP
RRDILETQRDEAVRIVADYDALRNRWALYNQVKQSLLDAQTALDKVKGKEPERRKLAQQV
QFLTALTPVYELYKENKSKGDNLHTLEKTLAETQQLLATAQATEAECRKDYEVLQAQSDA
MQENRVTLTYWEQQAESLIELESTQKELDCLIKKRAEYDVVQAEKAASAGREQVQNLQYE
IQTLRDKISLNIKETDQIYTVKDKLSVLDTFKTVQADWQTLSHAMASKVESLSKLDNEVH
SAKVQLERLEHLLQEGRAYELTDLVKDDAPCPVCGSLEHPALAKKPELYPTKKEVDAVRK
LYQDLVEKLAKEQGAKESLAQRIAETEVTLDKQQAEIASLSDGLSADTFDDIYTSLQADM
IRLETLRTDTEVLQDTLRHKEDELAAVEKEVSDLEKAKDTVASEAHRLDVKIGTVQAKAD
TLSANLRIDDADTWRTKLTNLKAELSIYDEDVTKAQTRLESARQTVSGDAGRVDTLTSQV
RQEAESLATVRKVYEQSLAAIDLVESEFEEQLADYEQCDTYREKLKILDADYQKAQAVYE
SAQKRADSTVKPEDTASDEMYEAAVQSRDDIVGALATWDKESKQIEDALGKLEALDAAMG
EARDEVEFLGRLNDLANGGEQGFKNVTFERYVLGAILDEVVYAANLRLQRMSRSRYSLER
SDYTGGGRGKQGLDLAVMDTFTGQSRPVNTLSGGETFLASMALALGLADVIQSYAGGIHM
DTIFIDEGFGTLDPDTLELAMETLVQLQSSGRLIGIISHVPELKSRIPAHLEVTRGDDGS
TARFVIN
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctatatcattgactatgcaggccttcggtccgtatcgcgatacgatatcattg
gattttaatgcactggaaggtcattcgatgtttcttatttccggtcctacaggggctgga
aaaacatctattctggatgccatcgtatatgcgttatatggcgagcctagcggagaagtg
cgtaagacggatgccatacgtagcgattttgcggaacctcatacgatgacatgcgttgaa
ttcacctttgccattggagcaaaaaaatatcgcatagagcgattaccgaagcagttggtg
gcaaagaaacgcggcaccggtatgcgcgaacagaatgccagtgcgaccgtgtatgccatg
aaggacggtgaatggcaggtgatcgccacatcggcggcagctgtacgtgaatccgttcaa
agtatcatcggatttcgaaaggaccaatttttacaggtcgttcttttaccgcaaggggaa
tttcgaaaattacttgtcgcatctaccggtgaacgtgaagaaatattgcacacgctgttt
agaaccgagttgtaccgaagattacaagatgctttaaaggaggcgtacgaatcgtccaaa
cagggaatcgaggaaaatctgactaaacagcagattgtattgcaatcgattccccacgag
gaagatacgccgatattgacgatagagcatgtacggcaattattggcgtcccgcgtaccg
cgacgcgatatacttgagacacaacgtgatgaggcggtgcgcattgttgcggactatgat
gcgttgcgtaacagatgggctttatataatcaggtgaaacagtctttgcttgatgcacaa
accgctttagataaggtgaaagggaaagaaccggagcgacgtaaactggctcagcaagta
cagttcttgacggccttaacacctgtatatgaattatataaagaaaataaaagcaagggg
gacaacttacatacgttagagaagaccttggcggagacacagcagttactggctacagct
caagctactgaggctgaatgtcgtaaagattatgaggtattacaggcacagtcggatgcg
atgcaggaaaatcgggtaacgttgacatactgggaacagcaggctgaaagcttgatagaa
ttagagtcgactcaaaaggaactcgattgtttaataaaaaaacgcgccgaatatgatgtg
gtacaagctgagaaagccgcctcagcaggtcgtgagcaagttcaaaatctgcaatatgag
atacagactttgcgggataagataagtttaaatataaaagaaactgatcagatttatacc
gtaaaggataaactgtctgtactggatactttcaaaacagtacaggctgattggcagaca
ctttcacacgctatggccagtaaagttgagagcctgtctaaattagataatgaggtgcat
tccgccaaagtacagttggagcgcttggaacatctgttacaggaggggcgcgcctatgaa
ctgaccgaccttgtaaaagatgacgcaccgtgccctgtgtgcggttcgttggaacatcct
gcgctggcgaagaagccggagttataccctacgaagaaagaagtggacgcggttcgcaag
ttatatcaagatttggtagaaaagttggcgaaggagcagggcgcgaaagagtctctggcg
cagagaatagctgaaactgaagtaactcttgataaacagcaggctgagatcgcctctctg
agcgacggattgtctgctgatactttcgatgatatctatacaagtttgcaagctgatatg
attcgattggaaacactgcgtacggatactgaagtactgcaagatacacttcgccacaaa
gaagacgaacttgctgctgtggagaaggaggtttctgatttagaaaaggctaaggatact
gttgcatcagaggctcaccgattagatgtgaaaatcggaacggttcaggcgaaggcggat
acgctatcggctaatttgcgtatagatgatgccgatacttggcggacgaagctgacgaac
ttgaaggcggagttaagtatatacgatgaggatgttacgaaggctcaaacgcgactggaa
agcgcacgacaaacggttagcggtgatgcaggtcgtgtcgatacgttgacgtctcaggtt
agacaggaggcagaatctctagcaactgttcgtaaagtgtatgaacagtctcttgcggcg
atagacttggtagagtctgaattcgaagagcaactagcggactatgaacaatgcgatacg
tatcgtgagaagttaaaaatattagatgctgattatcagaaggcccaagccgtatatgaa
tcggcacagaagagagcagattcaacagtaaagcctgaagatacggcatccgatgaaatg
tacgaagccgcggtacaatcccgtgatgatatagtaggtgctcttgccacatgggacaag
gaatcaaaacaaatagaggatgcactcgggaaattggaagcccttgatgcggctatgggt
gaggctcgtgatgaagtggaatttctcggacgtcttaatgatttggcgaatggaggggaa
caaggctttaaaaatgttacctttgaacgctatgtgttaggtgctatcttggatgaagtg
gtatatgcggcgaatttacgattgcagagaatgagtcgcagccgttattccttagagcgg
tccgactataccggaggcggacgaggtaagcagggtcttgatttagccgtgatggatact
ttcacagggcagtctaggccggtgaatacattatccggtggagaaacctttctcgcatct
atggcactggccttaggcttggcggatgttattcaaagctatgcaggcggaatccatatg
gatacgatttttatcgatgaagggtttggcactttggatccggatacgttggaactggcg
atggaaacattggtgcaactgcaatcgtcgggacgcctcatcggcattatctctcatgtg
cctgagttgaaatcccgtataccggcacatcttgaagtgactcgcggcgatgacggcagt
acggcgcggttcgttattaattag
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integrated database retrieval system
