Veillonella rodentium: 44547418_01467
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Entry
44547418_01467 CDS
T05216
Symbol
sbcD_2
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vrm
Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_01467 (sbcD_2)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
44547418_01467 (sbcD_2)
Archaeal homologous recombinant proteins
44547418_01467 (sbcD_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF6242
Motif
Other DBs
NCBI-ProteinID:
SNV71714
UniProt:
A0A239ZLV0
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All DBs
Position
1:complement(1570262..1571437)
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AA seq
391 aa
AA seq
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MRLLHTADWHLGRIFYGQYLTDDQAHVLEHQFFHILRDEKIDGVLLAGDVFDRAVPPVEA
VELWDSIITRLAMDYKIPLFVVSGNHDGAERLEVGRSMLGRSGIHIWGSPQRSLEPYVFE
ASDGAVAICPMPYSEPRRIAVSLGLGESMSTVEAAINVHSYDPMYQAWSEHLQSQIPKGM
RSIALSHVFVMGGEVGGSERTLSLGGSEIVNPAVFKDFHYTALGHLHGPQRMGADYIRYS
GSPLKYSFDEHAQKKSFTIVEMDGKGRVEIDTIPVEAKRDVVILEGYFEDLLNNTAFQNA
HRDDYVQARLLDTMPIMDGMAKLRQVYHQCMTIELVGRVAMSTTEISEPIFKSLNERELF
NQFAESVWQQPLTEREASYINVLWDRIVKED
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgttacatacggcggattggcatttggggcgtattttttacggtcaatattta
acggatgatcaggcccatgtgttagaacatcagttttttcatatccttcgtgatgaaaaa
atagacggagtgcttttggcgggcgacgtattcgatcgcgcggtaccgcctgtggaggct
gttgaactatgggactctatcattacccgtctcgccatggattataagattcccttattt
gtggtcagcggaaatcacgatggggcggaacggctcgaggtaggtcggtcgatgctaggt
cgttccggcattcatatctggggttctccgcagcgttcgttggaaccctatgttttcgag
gcttccgatggggcggtggcaatttgtcctatgccctatagcgagccgaggcgtatagcg
gttagtctaggacttggtgaaagtatgtctaccgtagaagcagctattaatgttcatagc
tatgacccgatgtatcaggcctggagcgaacatctgcagagtcagatcccgaaaggtatg
cgctctatcgcgcttagccatgtctttgtgatgggcggtgaggtaggcggttcagagcgt
accttgtcgcttgggggcagcgagatagttaatccggctgtatttaaagattttcactat
acggctcttggtcatttacatgggccgcaacgcatgggggcggactatattcgttatagc
ggatctcctttaaagtattcctttgatgaacatgcgcagaaaaaatctttcaccattgtc
gagatggatgggaaagggcgtgttgagattgataccattcctgttgaggcgaagagggat
gtggtgattcttgaaggatattttgaagatttgttgaataatacagcttttcaaaatgca
catcgtgatgattacgtacaggctcgcctgctcgatacgatgccgataatggatggaatg
gcaaagttgcggcaagtgtatcatcagtgtatgaccattgagctggtcggtcgagttgca
atgtcgacgacggaaatatcggaacctatttttaaatcgcttaatgagcgggagctgttc
aatcaattcgccgagtctgtctggcaacagccgttgacggagcgagaagcatcctatatc
aatgtcttgtgggatcgtattgtgaaggaggactaa
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