Veillonella rodentium: 44547418_01725
Help
Entry
44547418_01725 CDS
T05216
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vrm
Veillonella rodentium
Pathway
vrm03420
Nucleotide excision repair
vrm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
44547418_01725 (pcrA_2)
03430 Mismatch repair
44547418_01725 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_01725 (pcrA_2)
Enzymes [BR:
vrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
44547418_01725 (pcrA_2)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
44547418_01725 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
44547418_01725 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
DEDDh_C
AAA_30
Viral_helicase1
DEAD
ResIII
DNA_pol_A_exo1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
SNV74538
UniProt:
A0A239ZUT6
LinkDB
All DBs
Position
1:complement(1833939..1836527)
Genome browser
AA seq
862 aa
AA seq
DB search
MIINREQQRVIDEVERNILLLASAGTGKTNTLAYRVAHLIEGGFAEADNILCMTFTNKAA
NEMKDRIQSLVGSPAKAVEISTFHSFCFFVLQQEGKRNESLYTDVTIFDEEDCKELYGPY
KPKQLRDINFANVIAMVKEYRSLYGFYTDDTAADYKNTIYRLRTENYKAVEAQFSSFNKV
LYDELSLFWAEGHQWLSAYDESLRAVHGVDFTDLICGVHRLFQDPVVRERWRSRYSYISV
DEMQDTGLLEYKVLEMLWQGNHVLLCGDYFQTIYEWRGSDPFRLLKRFDEDFKPLKIIFY
ENYRSNRTLFTMAFRTLQAMFPDLVGSVYNELPRANSESTGKPVLIKGSKNEYQEGRYIF
DSICVLPKDTSIGVLVRDNKTAQRLSSSFERLNAEKPEGERRHFMIIDEYKFFRRQEIKD
VMAYFKLLMNPNDSVSAKRIIKRYVAGIGDNRIAAIESPETRQVGLKLTDFMDMPIFEDE
PYAKLVQGLERREVIVYDVESTGTDTSQDRIIQIAAIRIDEEGQVLETFERFINPGRPVG
QSEEVHGFSDAYLAEHGEDPVTVLTAFKEFSENAVIVGHNVNYDISIFTNELARHNLGQP
EFKAVYDTLDIFRRFHPNLPNHKLGFLASHFPIHHEPTHNAMDDILATAQLLIYAVKENI
IPTTTGRMVAINKYKAAFTNIASQMATLRRKALTEIPTQLLAYIMNHMGVLEYYKSHGEA
AKVEHIRDLYRIMEKLDVDYDGPPGLARLNQILQMAALTAGEPVQQVKNDDRIPIITVHQ
AKGSEFDYVFLAGMNQGVFPSPFAIEEGREDEEKRLFYVAITRPKRELVITYKHENERGR
SVQPSPLLNYMPTDANLVERSS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaatcgtgagcagcaacgcgttattgatgaggtagaacggaatatcctcctg
ttggcgtccgccgggacgggaaaaacgaatacacttgcctatcgggtggcgcacctcatc
gaaggtggctttgcggaggcggacaacattttatgcatgacctttacaaataaggcggcc
aatgagatgaaggaccgcatccaatcccttgtaggcagccccgcaaaggctgtggaaatt
agtacattccacagcttttgctttttcgtgttgcagcaggaaggaaagcggaacgagtcc
ttatatacggatgtgaccatatttgatgaagaggactgcaaggaattatacgggccgtac
aagccgaaacagctgcgggatattaatttcgccaatgtaatcgctatggtgaaagaatac
cgctcgctgtacggattttatacggatgatacggcggcggattacaagaatacgatttat
cgcctccgcacggagaattacaaggccgtagaggcgcagttcagcagttttaataaggtt
ctttacgatgagttatctctattctgggccgaaggtcatcaatggttgagtgcctatgat
gaaagcttacgcgccgttcacggtgtggatttcacggaccttatctgcggtgtgcatcgc
ctctttcaggatcctgtggtgcgtgagcgctggcgcagtcgttatagctatatctcggta
gacgaaatgcaggatacgggacttttggagtataaggttcttgaaatgctgtggcaaggc
aatcacgtgctgttatgcggcgattactttcagactatttatgaatggcgcggttccgac
ccgtttcgcctgttaaagcggttcgatgaagattttaagcctttgaaaatcatattctac
gagaattaccggtcgaatcgaacgctctttacgatggcattcaggacattacaggccatg
ttccccgatttagtgggctccgtctataatgaactgcctcgtgccaatagtgaaagcacg
ggtaagccggtgctcatcaagggttctaaaaatgaatatcaggaggggcgatacattttt
gattccatctgcgtgttgccgaaggatacgagtatcggtgtcctcgtgcgggataataag
acggcacaacgtctcagttcgtcctttgaaaggctcaatgcggagaaaccggaaggggaa
cgccgtcactttatgattatcgacgagtataaattcttccgcaggcaggaaattaaagat
gtgatggcctatttcaagcttctcatgaatcctaatgattcggtcagcgccaagcgtatc
atcaagcgatatgtggcgggcatcggggataatcgtatcgccgctatcgagagtcctgaa
acaaggcaggtggggttaaaactgacggactttatggatatgcctatctttgaagatgaa
ccgtacgccaagctcgtacagggtttagagcgccgtgaagtaatcgtgtacgatgttgaa
agtaccggcacggacacgtcgcaggatcgcatcatacagatcgcggcgattcgcattgat
gaggaggggcaggtcttagagacctttgagcgttttatcaatccgggacggccggtaggg
cagtccgaagaggttcacggtttttccgatgcgtatttggcggagcatggtgaagaccct
gtaaccgttcttaccgcttttaaggagttttccgagaatgccgtcatcgtgggtcataat
gtgaattacgatatcagtatttttacgaatgaactggcccgccataatttaggtcagccc
gagttcaaggccgtgtatgatacattggatatattccggcgcttccatccgaaccttccg
aaccataagctggggtttctggcatctcatttccccattcatcatgagcctacacataat
gcgatggatgatattctggcgacggctcagcttttaatttatgcggtgaaagaaaacatc
atacctaccacgacgggacgtatggtggcaatcaataagtataaggcggctttcaccaat
atcgcctcgcaaatggcgacattgcgccgcaaggcgttgacggagattcccacacaactc
ttggcgtatatcatgaatcatatgggtgttcttgagtattacaaatctcatggggaagcg
gccaaggtggagcatattcgcgatttataccgcatcatggaaaagctggacgtcgactat
gacggaccgcccggattggcgcgattgaatcagatcctgcagatggcggcccttacggcc
ggtgagccggttcaacaggtgaaaaatgatgatcggattccgattatcacggttcatcag
gcaaagggcagcgagtttgattacgtattcctggcggggatgaatcaaggtgtattcccg
agtccttttgcgattgaagaaggtcgtgaagatgaggagaaacgcctgttctatgtagcg
attacgcgaccgaaacgggaactggtcatcacctataagcatgaaaatgagcgggggcgc
agcgttcaaccgagcccattgttgaattatatgccgacagatgcgaatctcgtagaaagg
agcagttaa
DBGET
integrated database retrieval system
