Veillonella rodentium: 44547418_01729
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Entry
44547418_01729 CDS
T05216
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vrm
Veillonella rodentium
Pathway
vrm03030
DNA replication
vrm03430
Mismatch repair
vrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
44547418_01729 (dnaX_2)
03430 Mismatch repair
44547418_01729 (dnaX_2)
03440 Homologous recombination
44547418_01729 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vrm03032
]
44547418_01729 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_01729 (dnaX_2)
Enzymes [BR:
vrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
44547418_01729 (dnaX_2)
DNA replication proteins [BR:
vrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
44547418_01729 (dnaX_2)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
44547418_01729 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_30
TIP49
AAA_22
AAA_5
ResIII
RCF1-5-like_lid
AAA_14
AAA_19
AAA_7
AAA_16
AAA_assoc_2
Mg_chelatase
TsaE
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
SNV74575
UniProt:
A0A239ZU22
LinkDB
All DBs
Position
1:complement(1837830..1840439)
Genome browser
AA seq
869 aa
AA seq
DB search
MAYIALYRKYRPQTFTDVVGQNQVSDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFAR
AINCEHGPTDHPCNECGACKSILSGQSMDVLEIDAASNRGIDEVRALRESVKFMPVEGRK
KVFIIDEAHMLTTEAWNALLKTIEEPPAHVMFIFATTEIEKLPVTIVSRCQRYTFRRITS
DDIAQRLSYVADKEGFGLEPAAAQLIAVHADGGLRDALSILDQCAGMATGDITPKVVEEL
IGLVSKEWIIHFLDALQNGDGPKLLSYIQDALSEGRDATQIMEALIQHVRALLVCKVAPD
ADELKVYDAFKSEFSAQAESIDFNRLNRYIRSAQSIMNDAKQVDNPRTIIEMGLLALCAQ
LGDADESLEDRVYALESAERTEREDLLNRMARLEQRGPAVSVAPIYGASDSVAPQGPMGK
DFLQEPVEDCNSDNGMSASAMDPVTTPDVGRTPPPQGRVGAVPPPSNGRPGMTPPPHGAV
GMTPPPGMVPPTGSPIAANKSQPGRKNNSGISTEAVIGDNILSSKEYRNVQANVIKYLKD
SNRNMTSTVLGQGQLVYVDSTKAVMAFKNKLHLNVLSNENNLAEVADAFAYMLGYAVRVE
VVDALTQAYKDYKRAGSGQQQQSASSVQQQHSARSAQQQSADSAQQQRGGSTQQQTKASL
QEAADSSSATELASSQHVDVTRLDEKSQSDNSGKAEKVDNSNGINNAGHSQSSETSEDDI
PVSSFDDIPIESLDEEYIPSLDDVPPHDLASVTVISDDGEVLERPMDSGAHIEVEAVPKP
GRGSRVTKAANGNRSAASAEDKMLPAHGENIQLSQKTVEVEPIDSVEVTREYPWDPEHMT
DEEKRNPLLAETLGKLSEDHDIIVEVIEE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcttatatcgcattgtatcgcaagtatcgaccgcagacgtttaccgatgtagtaggg
caaaaccaggtatcggatacgttgatgcgcgctattcgcgaggataaggtggcccatgcg
tatctgtttgccggcccgcgcgggacaggtaagacgagtatggcgaagatttttgcgcgt
gctatcaactgcgaacatggtccgacggatcatccctgtaatgaatgcggcgcctgcaag
tcgatcttgagcggtcagtccatggatgtccttgaaatcgatgccgcatcaaaccgtggt
atcgatgaggtccgtgctcttcgtgaaagcgtcaaatttatgcctgttgaggggcgcaaa
aaggtattcatcattgacgaagcccatatgctcacgacggaggcatggaatgcgttgtta
aagaccattgaggaacctccggcacatgtgatgtttatctttgccactacggaaatcgaa
aaactgccggttaccatcgtatcccgttgccagcggtataccttcagacgaatcacgtcc
gatgatatcgcacagcgcttatcctatgtggcggataaagaaggcttcggtcttgaaccg
gcggcggcacagcttattgcggtgcatgcggacggcggtttgcgcgatgcgttgagcatc
ctggatcaatgtgcaggtatggctaccggcgatattacgccgaaagtcgtagaggaactc
atcggtctcgtcagcaaggaatggattattcatttcctcgatgccctgcagaatggtgac
ggacctaagttgttgtcctatattcaggacgcgctttcggaaggtcgcgatgcaacgcag
attatggaggctttaattcagcatgtgcgggccctgctcgtgtgcaaggtggcacctgat
gcggatgaactaaaggtatatgacgcgttcaagagtgaattttcggcacaggccgagtct
atagattttaatcggctcaatcgatatatccgtagcgctcagtccatcatgaatgatgca
aaacaggtggataatccgcgaaccatcattgagatggggcttcttgctctttgcgcgcag
ttaggcgatgctgatgaaagcttagaagatcgcgtgtacgctcttgaatcggcagagcga
accgagcgtgaagacttacttaacagaatggcccggttggagcagagaggtcctgcggtt
tccgttgcgccgatatatggagcttccgattctgtagcccctcagggtcctatgggtaaa
gattttttgcaagaacctgtagaggattgtaatagtgataatggtatgtccgcatccgct
atggatccggtgactacacctgatgtagggcggactccgcctccacaaggccgagtcggg
gctgttccgccaccttccaacggtagaccggggatgactccgccacctcatggtgcggtg
ggcatgactccgcctccggggatggtgcctccgacggggagtccgatagcggcaaataag
agtcagccgggacggaaaaataactccggtatcagtacagaggcggttatcggtgataac
atcctatcctctaaggagtatcggaatgtacaggccaatgttatcaagtatttaaaggac
agcaaccgcaatatgacttcaaccgtgttgggtcaagggcagctggtctatgtggattcg
acgaaagcggttatggcctttaaaaataaattgcatctcaatgtattgagtaatgaaaac
aatctcgccgaggtggctgatgcatttgcatatatgctaggatatgccgttcgcgtcgag
gttgtagatgcactcacacaggcctataaagattataaacgggccggcagcggacaacaa
cagcaaagtgcaagcagtgtgcaacaacagcatagtgccagaagcgcgcaacaacaaagt
gccgacagcgcacaacaacaaaggggcggcagcacgcagcaacagacgaaggcatcactg
caggaagcagctgattcatcatcggcgacagagctggcttcgtcgcagcatgtagatgta
acgcggcttgatgaaaaatctcaatccgataattcgggtaaagctgaaaaggtcgataat
tccaacggtattaacaatgctggacactctcagagttcagaaacttctgaggatgatata
cctgtcagctcttttgacgatattccgattgaatctctggatgaggaatatataccgtcc
ttagatgatgtgccgcctcatgacttggccagtgtcaccgttatcagtgatgacggtgaa
gtgctggaacggcctatggacagcggtgcacatatcgaggtggaagctgtcccaaagcct
gggcgcggaagccgtgtaacaaaagccgcaaacggtaacaggtcggctgcttccgctgaa
gataaaatgctaccggcgcacggtgaaaacatacagctttcacaaaagaccgtagaggtg
gagcctatcgacagtgtagaggtgacgcgggaatatccgtgggacccggagcatatgacc
gatgaggaaaaaagaaatcccctgttggcggaaacattaggtaagttatcagaagaccac
gacatcatcgtcgaggtcattgaagaatag
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