Veillonella rodentium: 44547418_01767
Help
Entry
44547418_01767 CDS
T05216
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vrm
Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:
vrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrm03400
]
44547418_01767 (addB)
Enzymes [BR:
vrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
44547418_01767 (addB)
DNA repair and recombination proteins [BR:
vrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
44547418_01767 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
SNV74991
UniProt:
A0A239ZUV4
LinkDB
All DBs
Position
1:complement(1888990..1892469)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSISIYYGRAGSGKTQAVCARIAQVMKECPGDPIILLVPEPATYRVERELAEFMPQKGFT
TVRVVGFGRLGYQVYQSIGSKGDHQSGLTAFGRAMLLRLVMKRKQQELGLLEQATKRPEF
SSVLQQLFSEFRAFRIGPDDLERGAESVKNGVLQKKLRELALCMAAYEEEISRHGERDID
PIMEIVEALPHSPLMENCHVFIDGFHWFTPTHYELIYTLFDLAKEAVITVDLPMAPEALN
VARRGEHLFSRPLEIYDTLVARYGSRIEWVGFDGKRGPRVVQALESDFFTSPARANSTDE
RISLIRGYNREREADAVARRILDYVESSEGARYRDVCVMLRESETYGDTLEKVFTRYGVP
HFIDRQRPMKNHPLGELLTDLFGIVRHSYSRDSMFRLLKTDLMPLTREAVDELENYVLEF
GIDHYKWESESWSYLQGFQRGRDDEETHFDAPRRARVNVSRQIIMDILSPWFDFASNAEG
HTGGEWGAELYRILEVLQVPHRLYEWTQDAEASGDQESKASHEQMYNAVISFIDEVSSVM
KDEILTLDEMMLLLEEGLSDVNYSMIPPSLDHVVITTIERGYSQWWPKVFVMGLNQGVFP
QSMGDEGLIKDRERQELAEAGITLAEGALPKAFNENFLLYLAMTRGGDSLTLSYAGSGED
GTGLEPALVIKRLESLGYVDEAVDVPLTIMPDTEERYLWHPNQSLSLLSERWGALLSGEP
VSPVWWGLYNWARRSAAYRTRLAEVSRGIRDNNDVPVITQDLVNGLFLSKGYMSGSVTRL
EKYQQCPFRFYAQYGLRLEPRKVRSFGAPEIGTFLHANLERLGNYLLEHNQQWRDLDEST
QREMCSAVVDEIVRDNQFSDDESSAYQEAIESRVQRTLESTVGRLVEWSKRSDFNTKYLE
QNFGRGGGWDSINVSLGADRYLRLAGQIDRIDEYTTDGQTYGMVIDYKSGGAKVSAQDVY
YGLKLQLMTYLLALESAYGGMHGDAMSPAAVVYTYVKNPQTSSDAPISYDDASELAKKNS
TLQNSGYFADDVELLTHIDNQVLNYGSGKGPYVPLRIGKDQQIHKGDKPKVKSSGDFDVM
CRYTRHVMARAGQQIGDGLFPIKPYQLNGVRPCTYCEYQNVCRFDSSRNQYNYLSRLAEE
DALNSMKEALNEGGEDHGC
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagtatatattacggacgcgccggatccggcaagacgcaggccgtctgcgcg
cgaattgcacaagtgatgaaagaatgcccgggggacccgattattctgctcgtgcccgaa
ccggcaacttatcgggtggaacgggaactggcggagtttatgcctcaaaaaggttttacg
acggtgcgggttgtaggctttggacgcctcggataccaagtgtaccagtctatcggttcc
aaaggggatcatcaatcgggactgacagcgttcggtcgcgccatgttgctgcgccttgtg
atgaagcgcaaacagcaggaattagggctcctggaacaggcgacgaaacgtcctgagttc
tcgtcggtgctgcaacaattattttccgagtttcgtgcgtttcgcatcgggccggatgat
ctggaacgcggcgctgaatccgtaaagaacggtgtgttgcagaagaagttgcgtgaactc
gctctatgcatggcggcatacgaagaagagatcagccgtcacggcgagcgcgatatagac
ccgatcatggaaatcgtggaggcgttgccgcactccccgctgatggagaattgccatgtc
tttatcgacggtttccattggtttacgccgactcattatgaactgatttatactctgttt
gatctggcgaaggaagcggttatcaccgtcgatttgccgatggctcccgaagcgctcaat
gttgcacgccgcggagagcatctgttcagccgtcctcttgaaatctatgacacgttggtc
gcccgatatggtagccgaatcgaatgggtaggctttgacggcaagcggggcccccgggtg
gtacaggcgttagagtccgatttctttacgagtcccgcaagggcgaactctacggatgag
cggatttccctcatcagaggatataatcgggagcgcgaagccgatgcggtggcgcggcgt
atattggattatgtggaatcctctgaaggtgcgcggtatcgcgatgtgtgcgtcatgctg
cgcgaatcggaaacttatggggacacattggaaaaggtttttacccgttacggtgttcca
cattttatcgaccgtcagcgaccgatgaaaaatcatccgttaggagaactgttgacggat
ttatttggtatcgtccgtcatagctacagtcgtgacagcatgttccgtttattgaaaacg
gatttaatgcctcttacgcgcgaggccgtcgatgaattggaaaattacgttctcgaattc
ggtatcgatcattataaatgggaatctgaaagctggtcgtatttacagggctttcaaagg
gggcgggacgatgaggaaacccattttgatgcgcctcgcagagcgcgtgtcaatgtgtcc
cgtcagattatcatggacattttgtcgccgtggtttgatttcgcatcgaatgcggagggc
catacgggtggcgaatggggcgccgagctgtatcgcattttagaggtgctgcaggtgccg
caccgcctctatgaatggactcaggatgccgaggcgagcggagatcaggagtctaaggcg
agtcatgagcagatgtataatgcggtcatttcgttcattgacgaagtatcgtcggtgatg
aaggatgaaattctcacgttagatgagatgatgctgctccttgaagaaggcttgagtgac
gtcaattactccatgattccgccgtctctagatcatgtggtaatcaccaccatcgagcgc
ggatatagtcagtggtggccgaaggttttcgtgatgggcctcaatcagggagtattcccg
caaagcatgggcgatgaaggactcatcaaggaccgggagcgtcaggaactggccgaggcc
ggcattactcttgcggaaggggcactgccgaaggcgttcaacgaaaatttcctgctctac
ctggcgatgacaagaggcggagattcgttgacattgtcctatgccggatccggcgaggac
ggtacggggcttgaaccggcccttgtgattaagcgtctggaatcgctcggctatgtggat
gaggctgtcgatgtgccgcttaccatcatgcccgacacggaagaacgctacttatggcat
ccgaatcagagtctgtccctcctgtcggaacgatggggggcgcttcttagcggcgaacct
gtgagtcccgtgtggtggggcctttataactgggcccgtcgaagtgcggcctatcgaact
cgtctggccgaggtgtcgcgcggtattcgcgataataacgacgtgccggtcatcacgcag
gacctggtaaacggtctgttcttatcaaagggctacatgtccggctccgtgacgcgtctt
gaaaaataccagcaatgtccgttccgcttctatgcacagtacggattgcgactggaaccg
cgcaaggtgcgttccttcggagcgcctgaaatcggtaccttcctgcacgccaatctggag
cgcctcggcaattatctgctggaacataatcagcagtggcgcgatttggatgagtcgacg
cagcgcgagatgtgcagtgctgttgtcgatgaaatcgtgagagacaatcagttcagtgat
gatgaaagctccgcgtatcaggaggctatcgaaagccgtgtgcagcgcacattggaatcg
actgtaggacgtctcgtggaatggtcgaagcgcagcgatttcaatacgaagtatctggag
cagaatttcggccgcggaggcggctgggattcgattaatgtgtctctcggcgctgatcgc
tatctccgtcttgcgggacagatcgacagaatcgatgaatataccacggacggtcaaacg
tacggtatggtcatcgactacaagtcgggcggtgccaaggtgagcgctcaggatgtgtat
tacggactcaagctgcagctgatgacatatttactggcattggaatccgcatacggcgga
atgcatggcgatgcgatgtctccggctgcggtcgtatatacgtatgttaagaatccgcag
acatcgtcggatgcgcctatatcctatgatgacgcgtcggagctggctaagaagaacagc
accttgcagaacagcggttattttgcggatgatgtggaactgttgacgcacattgacaat
caggtgcttaattatggctccggtaaagggccttacgtgccgcttcgcatcggtaaggat
cagcagattcataaaggcgacaagcctaaggtgaagagctccggcgactttgacgttatg
tgccggtatactcgtcacgtgatggcccgggcgggacagcagataggggacggattgttt
cctatcaagccgtatcagctgaacggcgtgcggccgtgtacctattgcgaatatcagaac
gtgtgccgctttgattcgagtcgcaatcaatacaattatttatccagactggcggaagag
gatgcgctgaactctatgaaagaagcattgaatgaaggaggtgaagaccatggctgttaa
DBGET
integrated database retrieval system
