Vibrio rotiferianus: BSZ04_01225
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Entry
BSZ04_01225 CDS
T05115
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vro03016
]
BSZ04_01225
Enzymes [BR:
vro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BSZ04_01225
Transfer RNA biogenesis [BR:
vro03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BSZ04_01225
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ASI93675
UniProt:
A0A2K7T0M9
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All DBs
Position
1:234680..236683
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AA seq
667 aa
AA seq
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MFQDNPLLAQLKQQIQENLPKKEGSVKATDKGFGFLEVDSKTSFFIPPAYMKKCMHGDKV
VAIIRTENEREVAEPQELLEQAVTRFIGRVKMFKGKLNVAPDHPQLKKLSLKAKLKKGLK
PDEFAEGDWVVAHLIRHPLKGDNTFFVEISEKITDSNDKIAPWWVTLAQNDLPNSEPAGI
ENWELKDDADLERVDMTHVPFVTIDGESTKDMDDALYAKKTESGDFELTIAIADPTAYIT
PEDDMDKVARERGYTIYLPGRNIPMLPRDLADNLCSLIEGEIRPAICCTVTVSKDGVIGD
DINFFAANIKSHARLAYDHVSDWLENGSSDRWQPSEEIATIVRDLYDFSLARADWREKNA
VVFPDRPDYRFELSEDNDVVAIHADMRRSANRLVEESMITANICAGRTLRDKFETGVFNT
HAGLKAEKIEDVVQMVNPEGTLEFTAESIATLEGFAALRRWLGVQESSYLDNRIRKFQTY
SEVGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILNKEPIQTPDDEVGEELAL
HRKHHKIAERNVSDWLYARTLADEPNKQTCFTGEIFDINRAGARVRLLENGAAAFIPGSL
ILDNKERIECNGDNGTVSIDKEVVYKLGDTLEVILTDVNQENRSLVAKPTQVFADAPATD
AKETVSE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccactattagctcagcttaagcagcaaatccaagaaaatctgcct
aaaaaagaaggctcagtcaaagcaactgataaaggctttggcttcctggaagtggatagc
aaaaccagcttcttcatcccaccagcgtacatgaagaagtgcatgcacggcgacaaagtg
gttgccatcatccgcacggaaaacgaacgtgaagttgcagaaccacaagagctgctagaa
caagccgtaactcgctttattggccgagtaaaaatgttcaaaggcaagctaaacgttgca
cctgatcacccacagcttaaaaagctatctcttaaagcgaagctaaagaaaggtctaaaa
cctgacgaattcgcagaaggcgactgggttgtcgcacatcttattcgccaccctcttaaa
ggcgataacactttcttcgtagaaatttctgagaagattactgattcaaacgacaagatt
gctccttggtgggtaacgcttgctcaaaacgatctaccaaactctgagccagcaggcatc
gaaaactgggaactgaaagacgacgcagatctagaacgcgtcgacatgactcacgttcct
ttcgtaactatcgatggtgaatcaaccaaagatatggacgatgcactgtacgcgaaaaaa
acagaatctggtgatttcgaactgactatcgcaatcgcggatccaaccgcgtacatcaca
cctgaagatgatatggataaagtcgcccgtgagcgtggctacaccatctaccttccaggt
cgcaacatcccaatgctgcctcgtgatctagcggacaacttatgttctctaatcgaaggt
gaaatccgccctgctatctgctgtacagttacagtaagcaaagatggcgtaattggtgat
gacatcaacttcttcgctgcaaacatcaaatctcacgcacgtcttgcatacgaccacgtc
tctgattggttagaaaacggcagctcagacagatggcagccatcagaagagatcgcaact
atcgttcgtgacctgtatgacttctcacttgctcgtgcagattggcgtgaaaagaacgca
gttgtattcccagatcgtccagactaccgcttcgaactaagcgaagacaacgacgttgta
gcaatccacgctgacatgcgtcgcagtgcaaaccgcctagttgaagagtctatgatcacc
gcaaacatctgtgctggccgtacacttcgtgacaagtttgaaacgggcgtcttcaacacg
cacgcaggtttgaaagcagaaaagatcgaagacgtcgttcaaatggtaaaccctgaaggc
acgcttgagttcacagcggaatctatcgccacattagaaggttttgctgcgctacgccgc
tggttgggtgttcaagaaagctcgtacctagataatcgcattcgtaaattccaaacttac
agtgaagtgggtaaccaaccactgcctcactacgcaatgggattggacatctacgctact
tggacatcaccaattcgtaagtacggcgatatgatcaatcatcgcatgctaaaagccgtg
attctaaacaaagaaccgatccaaacaccagatgatgaagttggcgaagagctagcattg
catcgtaagcatcataaaatcgctgaacgaaatgtctctgattggctatacgcacgtact
cttgcagacgagccaaacaagcaaacgtgtttcacaggtgagatttttgacattaatcgt
gcgggagcacgtgtccgacttctcgaaaatggcgcagcagcctttattcctggtagcttg
attcttgataataaagaaagaattgagtgcaatggcgacaacggtactgtttcgatcgat
aaagaagtggtatacaaactgggtgatacattagaagttattctaactgatgtgaatcaa
gagaatcgcagtttggtcgctaaaccaacacaagtatttgctgacgctccggcaactgat
gccaaagagacagtaagcgaataa
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