Vibrio rotiferianus: BSZ04_01560
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Entry
BSZ04_01560 CDS
T05115
Name
(GenBank) hypothetical protein
KO
K10948
hemolysin
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vro03110
]
BSZ04_01560
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vro02000
]
BSZ04_01560
02042 Bacterial toxins [BR:
vro02042
]
BSZ04_01560
04091 Lectins [BR:
vro04091
]
BSZ04_01560
Chaperones and folding catalysts [BR:
vro03110
]
Intramolecular chaperones
Others
BSZ04_01560
Transporters [BR:
vro02000
]
Other transporters
Pores ion channels [TC:
1
]
BSZ04_01560
Bacterial toxins [BR:
vro02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
BSZ04_01560
Lectins [BR:
vro04091
]
R-type lectins
BSZ04_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ricin_B_lectin
Motif
Other DBs
NCBI-ProteinID:
ASI93739
LinkDB
All DBs
Position
1:complement(309040..310818)
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AA seq
592 aa
AA seq
DB search
MSLSNSEVFNEVCHIVPTTSLEIPSECVNYVLLEMTKLSNEDRKEITSQVFGLGIVEPFV
LVTYSAMTPALTPMSQFDSDLITHLIDSRDNYASKAASSASQIESAYASRVARSASSGPD
TSSNPPVSYSWIYNQVIDLNNTYLYRNEKAVLSYELEAFSRLPIYDDLGQDHSQNPIYIR
LTLVGGDGVNFNTINYSNSSSVQEVGHPWRPSHQHNIYKYREYLDQVHIHTSWNNIAAGV
FDRFPKNNDQDRTGLTYTSSVQFGLGVSIPKLPINKLDFASTKSLTFTNGEYFDYDEEVG
LHQHSIRYFNKTYGTQQTPKNGYCEFLGPASGCWRYVNGGPNPPLREFDQRLMDTPYVNG
FVPDYSITYQIPRREAQEQGSSLFTVRTQIDGMALLGYESHQIGNRFYSGLANGTGQHYE
LSEYVDNLQLDINWNSPVFSGVEPSVIKADYGSDDGANCLTVKGNIVRSTSCPQSSTSNE
VLFVYTADGQIISFANDKCLDSSNEYLSLMACDQYPDNNQSWSWQDSHGILTSILHTKMY
GGSIKILDLENETEAGIPLVITTLEDAILNYPQAGFTTLSAKYRQDAVSSRN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattgtctaatagtgaagtattcaatgaagtttgtcatattgttccaacaactagc
ttggagattccaagtgaatgtgtgaattatgtattacttgaaatgactaagttgtcaaat
gaagataggaaagaaataacgtctcaggtatttggtttagggatagttgaaccatttgtt
ttggtcacatactctgctatgacgccagcgcttacacctatgagccagtttgattcagat
ctaattactcatctcattgattctcgagacaactatgcgtccaaagctgcttcaagcgca
agccaaattgaatcggcctatgcctctagagttgctaggagcgcatcatctggaccagat
acatcgtcaaatcctcctgtatcttattcgtggatatataaccaagttattgatttgaat
aatacgtatctatatcgaaatgaaaaagcggtcttatcctatgagttggaagcattctct
cgactgccaatttatgatgatttaggtcaagaccactcacaaaacccaatttatataaga
cttactcttgttggcggggatggggttaatttcaataccattaattattcaaactctagt
tctgtacaagaggttgggcacccttggaggcctagccatcaacataatatatataaatat
cgagagtacttagatcaagttcatattcatacctcttggaataatattgccgcaggtgtg
tttgatcgatttccgaagaacaatgaccaagatcgaactgggctgacttatacatcgtct
gttcagtttggtctcggtgttagcattcctaaactaccaattaataaactagactttgcc
tccactaagtcacttacttttaccaatggcgaatactttgactacgatgaggaagttggc
ttacatcaacattctattcgttatttcaataaaacttatggaactcaacagactccaaaa
aacggctattgtgaattcttaggtccggcgtctggttgttggagatatgtaaatggtgga
ccaaacccaccgctaagggagtttgaccaacgtctaatggatactccatatgtgaatgga
tttgtccctgattattcaataacttatcaaattccaaggcgtgaagctcaagaacaaggc
tcttcattgtttactgttcgcacccaaattgatggaatggctctactaggttacgaatca
catcaaattgggaatcgcttctatagtggtttggccaatggtactgggcagcattatgaa
ttgtcggaatatgttgataatttgcagctagatattaattggaacagtcctgttttttcc
ggggttgagcccagtgtgattaaggctgattacggttctgatgacggtgcaaactgtctg
actgtaaaaggcaacattgttcgtagtacgagctgtcctcaaagtagtacaagcaacgag
gtgctatttgtatacacagctgatgggcaaataatttctttcgctaatgataagtgtttg
gatagctcgaatgaatatttatctttaatggcttgcgatcagtaccctgataataaccaa
agttggtcttggcaagatagccacgggattttgacatcgatactccacactaagatgtat
ggtggtagtatcaaaatcttagacttggagaatgagacagaagcaggtattccacttgtg
attaccaccttagaagacgcaattctgaattatccacaagcaggcttcacgacacttagt
gcaaaatatcgtcaagatgcagttagctctcgcaattag
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