Vibrio rotiferianus: BSZ04_02420
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Entry
BSZ04_02420 CDS
T05115
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_02420
Enzymes [BR:
vro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BSZ04_02420
DNA repair and recombination proteins [BR:
vro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BSZ04_02420
Prokaryotic type
BSZ04_02420
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASI93896
LinkDB
All DBs
Position
1:complement(497546..498961)
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AA seq
471 aa
AA seq
DB search
MILVWFRRDLRTLDHTALKAALDSGQPVVAGFVATPEQWQEHHMAPMQADLIARRLVHLE
EELTELNIPLLYKEVPKFSDVTEVIKGWAISLNAESVMANIHYEVNEQALDREVSEVLAK
SDVTFEAFHDKCIHAPTTVLNKQGDYFKVFTPFKRAWLAKFQMPMVWKPEPQLKLSDDAL
KPVETDRYHADVAFSYSRDSSEQWHVSTGEILNRLREFARVRSDAYKAERDLPAVDGTSQ
LSPYLAIGALSPRQCIARLYAESPHSELTEGKATWLSEIIWREFYQHLLVFEPKLVKGKG
FIPWEDKIEWSYDETAFERWKKGTTGYPIVDAAMRQLNETGWMHNRLRMIVASFLTKDLH
IDWRWGEAYFMSKLVDGDFAANNGGWQWSASTGCDGQPYFRIFNPISQGEKFDSDGTFVR
HWVPEIKEVPNKFIHNPWLWSSFNLLDYHKPMVDHKVEREITLRLFKNAKE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggtttggtttcgacgtgacctaagaacgttagaccacacagcgcttaaggct
gctcttgattctgggcagcctgttgttgccggttttgttgcaacgccagagcaatggcaa
gaacaccacatggcacccatgcaggcggaccttattgcaagacgtttggtgcatcttgaa
gaagagctaacagagcttaatatcccacttctgtataaagaagtacccaaattttctgac
gtgactgaggtcatcaagggttgggcaatatcattgaacgcagaaagcgtcatggcgaac
atccattacgaggtcaatgaacaagcgctagaccgagaggtttcagaggttcttgctaaa
agcgacgtcacgttcgaagctttccacgacaaatgtattcatgcgccaaccacggtgtta
aacaagcagggtgactactttaaagtcttcactccttttaaacgtgcttggctggcgaag
ttccaaatgccgatggtgtggaaaccagaaccgcaattaaagctatctgatgatgcactt
aagccagttgaaactgatcgctatcatgctgatgtggctttttcttattcacgtgactca
agtgagcaatggcacgtctcgaccggagagatcctcaaccgattaagagaatttgctcga
gtgcgcagtgatgcctataaagcggaaagagatcttcctgctgttgatggaaccagccaa
ctatctccctaccttgcgattggtgcgttatcgccaagacaatgtatcgctaggctttat
gctgagagtcctcattctgagcttactgaaggtaaagcaacatggttgagcgaaatcatc
tggcgagagttctaccagcacttattagtgtttgaaccaaagctagtaaaaggaaaaggc
tttattccctgggaagataagattgaatggtcttatgatgaaacggcgttcgagcgttgg
aaaaagggaacgactggctatcctatcgttgacgctgccatgcgacaactcaatgagacg
ggctggatgcacaaccgcctacgcatgatagtggcaagcttcttaactaaagatcttcat
atcgattggcgttggggggaggcgtactttatgagtaagctggtggatggagactttgct
gccaacaatggaggttggcaatggtcggcatctacggggtgcgatgggcaaccttacttc
cgtatttttaacccaatcagtcagggcgagaagtttgactctgatggcacatttgttcgc
cattgggtgccggaaattaaagaagtgccaaataagtttattcataacccttggctatgg
agcagttttaatttactggattatcacaagccgatggttgatcacaaggtagaaagagag
ataaccttacggctctttaaaaacgccaaggaatag
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