Vibrio rotiferianus: BSZ04_03975
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Entry
BSZ04_03975 CDS
T05115
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vro
Vibrio rotiferianus
Pathway
vro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BSZ04_03975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vro02000
]
BSZ04_03975
02044 Secretion system [BR:
vro02044
]
BSZ04_03975
Transporters [BR:
vro02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
BSZ04_03975
Secretion system [BR:
vro02044
]
Type I secretion system
Adhesin protein transporter
BSZ04_03975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
Zeta_toxin
Glyco_hydro_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ASI94185
UniProt:
A0A2K7ST08
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All DBs
Position
1:850674..852788
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AA seq
704 aa
AA seq
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MKDPLLNSLIYVSRYYGLANSPEALINGLPLSDGKLTPFLLPRAAERAGLVAKENRAGLE
NISSLILPAILLLKGGDSCVLNSINLEKKEAEVTTLESGLVPIAIPLEELLEQYTGRYFL
VKKQFRYDERSPEVLKTKEGHWFWSTLWQSKRIYRDVLIASLLINIFAIAAPMFTRLVYD
KVVPNLAFETLWVLASGIFVVFLFDFLLKTLRNYFIDVAGKKSDILISSKLFSKVMGIRM
ESRPPSVGAFARHLQEFESIREFFTSATVSALIDLPFAILFLVIIWLMAGDLVYVPIVGV
VILIIHSLLIQGPLRRSIEEGSRLASQKYANLIESLSGLETVKLLSAQGQFQYRWEEAVA
HMANWNIKSRRITDSIQNAAGFVQQSSNVGMIILGVYLIANGDLTMGGLIAATMLSSRAI
GPLVQLSLLSTRYNQAKSSMTIINQVMEMPDEQEEGKRYIHRPIIQGKVELDRVTFHYPD
APVASIRDLSLTINPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDMEQLHHV
DVRRNIGCVPQDSNLFYGSIRDNITLGRPLADDRDVMDAANRAGVTVFTQADPAGLERQV
GEGGAMLSGGQRQAVTIARAFLGRPPVLLMDEPTSAMDNRSEMQIKHQLAQLKPAETLIL
ITHKTSMLDVVDRIIVMEKGSIIADGPKAQVLNDLKQGKVKAVS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccctttattaaactcgctcatctacgttagccgatactatgggttagcaaac
tcgccagaggccttgatcaacggcttaccgttatccgatggcaagctaaccccatttttg
cttcctagagcggctgaaagggctggccttgtcgcaaaagagaaccgtgcagggctggag
aatatctccagccttatcttaccggccatcttacttttaaaaggcggcgattcctgcgtc
ttaaacagtattaacttagaaaaaaaagaagccgaagtcacaacactagaaagtggcttg
gtgcctatcgcaatcccactagaagagctattagaacagtacactggtcgttactttctg
gtaaaaaagcagtttaggtatgacgagcgctctccagaggtactaaaaaccaaagaaggt
cactggttttggtcgacactgtggcaatctaaacgcatctatcgcgatgttctcatcgct
tctttgctcatcaatatctttgctattgcggccccaatgtttacccgtttggtatatgac
aaagtggtccctaaccttgcatttgaaaccctatgggttcttgctagtggtatttttgtt
gtcttcctgttcgacttcctcttaaaaacgcttcgaaactactttatcgatgtagcaggt
aaaaagtccgatatccttatctcctctaagctgtttagcaaagtcatgggaatccgaatg
gaatcgcgtcctccgtctgtgggtgcctttgcccgtcacttacaagagttcgaatctatt
cgagagttttttacctctgcaacagtaagcgcgttgattgacctaccattcgcgattcta
ttcttggtaataatttggcttatggctggtgatttggtctacgtaccaattgtcggtgtc
gtgattctcatcatccactctctattgattcagggtcctttacgtcgctcaatagaagaa
ggctctcgtcttgcttcacaaaaatatgccaacttgattgaaagcctatctgggttagaa
accgttaaattgctaagcgcccaaggtcagtttcaataccgctgggaagaagcggtcgcg
cacatggcaaactggaatatcaagagtcgccgcatcacagacagcatccaaaatgcggct
ggttttgttcagcaaagtagtaacgtggggatgatcatcttaggcgtatatctcatcgcc
aatggagatttgacgatgggcggtctgattgctgcaaccatgttaagtagccgagcgatt
ggcccactagtgcaactttcattactctcgactcgttacaaccaagcaaaatcttcgatg
accatcatcaatcaggtgatggaaatgcccgatgagcaagaagaaggtaaacgttatatt
caccgaccaattattcaaggtaaggtagaactcgatcgtgtcacgttccattacccagat
gcgcctgtcgcttcaatccgtgatcttagcttgacgatcaacccaggtgaaaaggtcgca
atcatcggccgtattggttcaggtaaaacgactctcgaacgcttgatcatggggctttat
aagccaactgaagggcatgttcgtattgatgatacggacatggagcaactccaccacgtc
gatgtacgtcgcaacataggttgtgttccacaagacagcaatctgttctatggctcaatt
cgtgacaacattacactggggcgcccgctagcagatgaccgagatgttatggatgcggct
aaccgtgcaggagtgaccgtatttactcaagccgatccagcgggtcttgaacgccaagtt
ggcgaaggtggggcgatgctatctggtggtcagcgtcaagcagtcactattgcacgagca
tttctgggtcgcccaccagtgctacttatggatgagccaacgagtgctatggataaccgc
tccgaaatgcaaatcaaacaccaattggcgcaattaaaacctgcagaaaccttaatcctg
ataactcacaaaacttcgatgctcgatgtggttgatcgaattatcgtgatggagaaaggc
agcattattgctgacggtccaaaagcacaagtactgaatgacttaaaacaaggcaaagta
aaagccgttagttaa
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