Vibrio rotiferianus: BSZ04_04375
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Entry
BSZ04_04375 CDS
T05115
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vro
Vibrio rotiferianus
Pathway
vro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSZ04_04375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vro03000
]
BSZ04_04375
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_04375
Enzymes [BR:
vro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BSZ04_04375
Transcription factors [BR:
vro03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BSZ04_04375
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSZ04_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ASI94261
LinkDB
All DBs
Position
1:931882..933249
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AA seq
455 aa
AA seq
DB search
MTINPYASLTREQCQRARMARDSRFDGRFYIAVKTTGIFCRPICPANLPKEENVEYFTDK
TQALKAGYRPCLRCRPDSAPGSWAWKGVETTFQRAITMIDRGELQNQSLAALSKRLGISD
RYLRMLFEQYLGMSPKQYAQYQQLMFAKQLLHSSSMSVTEIGFAAGFNSTRRFNDAFQKI
LQLTPSQIRRKEFDGMGTNRIVLPYRGALNWQHMLDFYRLRAIEGVEQVTEDAYLRNVAL
DDGQARFKVTQGEGYLEMEFDIEDVTKLLSLVTGVRRMFDLDADICTVEQYLEYIAPGLV
KTPGIRIPGVWSAWEAGVRAVLGQQVSVKAAIGQLNLLVETLSNDQQVRHFPTPEAIACA
DVSFLRMPQSRKDTLVRFAQYMQQNPEADPQQWLELKGIGPWTVSYAQLRGQSQPDCFLD
KDLVVKKAMPNYPSLNTHTASPWGSYATFHLWNQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaatccatacgcttctttaaccagggagcagtgccagagagcgcgtatggca
cgagacagtcgttttgacggacgcttttacattgcagtgaaaaccaccggcatcttttgt
cgccctatctgtcccgccaacttaccgaaagaagaaaatgtcgagtatttcaccgataaa
actcaagctttgaaggctgggtatcgcccttgtttgcgatgtcgacccgatagcgcccca
ggctcttgggcgtggaaaggtgtcgagacaacatttcaacgcgcgatcacaatgatcgat
cgcggagagttgcagaaccagtcccttgctgcattatcgaagcgcctagggatctcagat
cgttatttgcgcatgctgttcgagcaatatcttggaatgtcacccaagcaatacgctcaa
taccaacaactgatgtttgccaagcagttgctacactcgagctccatgtcagtcactgaa
attgggtttgccgcggggtttaatagtacgcgacgtttcaatgatgcgtttcaaaaaatc
ctgcaactaacgccatctcaaatacgccgaaaagagtttgatggcatggggacgaatcga
attgtattgccttatcgcggagcgttgaattggcaacatatgcttgatttctatcgctta
cgtgcaattgagggagtggagcaagttactgaagatgcatacctgcgcaacgttgctctg
gatgacggtcaggcgcgattcaaggtcacacagggagaaggttaccttgagatggagttt
gatattgaagacgtaaccaagctgctgagtctcgtgactggtgtgcgtcgtatgttcgac
ctcgatgcggatatctgtacggtggagcagtaccttgaatacattgcgccgggattagtc
aaaacaccgggtattcgtattccaggcgtgtggagtgcatgggaagccggagttcgtgct
gtgttagggcagcaagtatcggtcaaagcggcgattgggcagcttaatttgttggtagaa
acgctcagcaacgaccagcaagtacgtcacttcccaacgccagaagcaattgcctgtgcc
gatgtcagttttttgcgtatgccgcaaagtcgtaaagacacattggtgcgatttgctcag
tacatgcagcagaatccagaagcggacccacaacaatggctggagttgaaaggcataggc
ccgtggacggtgagctatgcgcaactgcgtggtcagtctcaaccggattgttttttagat
aaagacttggtggtgaagaaagccatgccaaactatccgtcattgaatactcatactgcg
tcgccttggggcagctacgcgacttttcacttatggaatcaatcatga
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