Vibrio rotiferianus: BSZ04_08485
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Entry
BSZ04_08485 CDS
T05115
Name
(GenBank) sensor domain-containing phosphodiesterase
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vro
Vibrio rotiferianus
Pathway
vro05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
BSZ04_08485
Enzymes [BR:
vro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
BSZ04_08485
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GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
Ribosomal_L5e
Motif
Other DBs
NCBI-ProteinID:
ASI95032
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All DBs
Position
1:1856271..1858181
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AA seq
636 aa
AA seq
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MGTFQTLDYEIPKSMRKSWQNIVNLLARIADVPTTLIMRVHPEHIEVNTASETPGNPYRV
GDKEELGHGLYCEHVIENKRELNVPNALLDEQWQDNPDIKLGMISYCGLPLYWPNGETFG
TICMLDTQENQYSDTYRELLSTFKESIEAQLAVVFQQHKLLRLNNELKHRVENRTTDLAQ
LSYSLTKEIDRRKAAEKQVDYQQTHDQGTGFLNRGALEAFLDDTLSAMNHDTESLVVLNI
GFSNARSIQTKYGFEAFDEVLKEFRFRLGHSESSYFITGRPSSNDLVIVVSGENIESKVQ
HLLEDITHISVGNFYINESEVHLHSYIGVVQASKSSYAKQLLQNACYAMLLCKESGESFS
YFCESHTQALNNHNQLESYLLQAVRNDDLMLYFQPKVLPHTHKWIGAEALLRWRHPVLGD
VSNEALIHMAEQNGLIFEVGAFVLRTAIDKAKQWSELVDNFKMAVNVSPIQLQNVNFAEQ
IEHLLETFHLPAHFLELEVTESALIADEVVARNTLNKLHKLGVTLSLDDFGTGYASFSYL
KKYPFDAIKIDKSFVQQMEKSDDDRAIICSIIHIAKKLELQVVIEGIESHQQEQFLIGEG
CDIGQGFLYGKPMPCNEFEQSLFNQNLLGGQYHYSS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggaacatttcaaacactagattatgaaatcccaaaatcaatgcgaaagagttggcaa
aacatagtcaatcttttagctcgcatcgccgatgtgccaacgacactgataatgcgtgtc
catccagagcacattgaggtgaacactgccagcgaaacaccggggaacccatatcgcgtc
ggggataaagaagagcttgggcacgggttgtattgtgagcatgtcattgaaaataagcgc
gagctaaacgtacctaacgcgctgcttgatgagcaatggcaagataacccagatattaaa
ctaggaatgatttcctattgtggcctaccactctattggccaaacggtgaaacctttggc
accatctgtatgctcgacacacaagagaatcaatattccgacacttatcgtgagttatta
agcacgtttaaagaatccattgaagcgcaactcgctgttgtttttcagcaacacaaacta
ttgcgattgaataatgaacttaaacatcgggtagaaaaccggacgacggaccttgcccaa
ctcagttactcattgaccaaagaaattgaccgccgcaaagccgctgagaagcaagtggat
taccaacaaactcatgatcaagggactggttttttgaatcgtggggcccttgaagccttc
ttagatgatacgctgagtgcaatgaatcacgacacagaatctttagtcgtccttaacatc
ggtttcagtaacgcgcgcagcattcagacgaagtatgggttcgaagcctttgacgaagtg
cttaaagagtttcgcttccgtcttggccacagtgagtcaagttatttcattacaggaaga
cccagctctaacgatttggtgattgttgtttcgggtgagaacatcgaatcaaaagttcag
cacctattggaagacattactcacattagtgtcggtaacttctatatcaatgagagcgaa
gtccacctacattcttacattggcgtagttcaggcaagtaaaagtagttacgcaaaacag
ttgctacagaatgcctgttacgcaatgctgttatgtaaagaatccggtgagtcattcagt
tacttctgtgagagtcacactcaagccctcaataaccataaccaattagaaagctattta
cttcaagccgtgcgtaatgacgacctaatgttgtacttccaacctaaagtgctgccccat
acgcacaagtggattggtgcagaagctttgttgcgttggcgccacccagtgctcggagat
gtttcaaatgaagctttaatccacatggcagaacaaaatggattgatatttgaagtgggt
gcgtttgttcttcgcaccgctatcgacaaggcgaagcaatggtctgagctggtagacaat
tttaagatggccgtgaacgtctctccaattcagctacagaatgttaattttgccgagcag
attgagcacttgctggaaaccttccatttgcctgcgcacttcctcgagttggaagtcacg
gaaagcgcgctcattgccgacgaagttgtcgcacgcaacacattgaataagctacataag
ctaggcgtgacattgtcacttgatgattttggtaccggttacgcatcgttcagttatttg
aagaaataccctttcgacgcgataaaaatcgataagagtttcgtacaacaaatggaaaaa
tctgacgatgatagagccatcatttgttcgatcattcacattgctaaaaagctcgaactt
caagtggtcatcgaagggatcgaatcccatcagcaagagcaatttttaattggagaaggt
tgtgatatcgggcaaggctttttgtatggtaaacccatgccttgcaatgaatttgagcaa
agtttgtttaatcaaaacctattaggtggtcaataccactattcttcctaa
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