Vibrio rotiferianus: BSZ04_09835 Help Entry BSZ04_09835       CDS       T05115                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism vro  Vibrio rotiferianus Pathway vro03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:vro00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     BSZ04_09835  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:vro03400]     BSZ04_09835 DNA repair and recombination proteins [BR:vro03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      BSZ04_09835   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       BSZ04_09835 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_23 RsgA_GTPase nSTAND3 NACHT BCA_ABC_TP_C DnaJ_CXXCXGXG Viral_helicase1 MMR_HSR1 AAA_21 AAA_25 Motif Other DBs NCBI-ProteinID:  ASI95331 LinkDB All DBs Position 2:complement(197190..200012) Genome browser AA seq 940 aa AA seqDB search MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC PTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKGEHVKTLENLAAQGFIRARID GETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD GEEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLS LAQGAIRGWDQKNYYYFQMLTALADHYGFDLHAPFNSLPKKTQDIILKGSGRTEVEFKYI NDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYISTKSCSSCGATRLRLEARNV FIADTTLPEIVELSIADALEFFHSLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTV LVVEHDEDAIRCADHVIDIGPGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVP KERTPRDPKKTVELLGATGNNLKNVDLSVPVGLFSCITGVSGSGKSTLINDTFFKIAHTQ LNGATTAHPSPYKTIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK GKTIDEVLEMTVEDARTFFDPVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLA RELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVIKTADWI IDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK NT seq 2823 nt NT seq  +upstreamnt  +downstreamnt atggataaaatagaagttcgtggtgcccgcacccataacctcaaagacatcaacctcact atcccccgcgataaactgattgtcattactggtttgagtggttctggtaaatcctctctc gcattcgatactttgtacgcggaaggtcagagacgatacgtagagtcgctatcagcttac gcacgccaatttttgtctcttatggaaaaaccggatgttgaccacatcgaaggtttgtct cctgcgatctcgattgagcagaaatcaacatcacacaacccacgttctaccgttggtacc attactgaggtgtacgactacctccgtctgctttacgcacgcgttggcgaacctcgttgt ccaacacaccatacgcctctggcagcacaaactatcagccaaatggtcgataaagtctta gagttgccagaaggcagcaaaatgatgctactcgctcctatcgtgaaagagcgtaaaggt gagcacgttaagacgctagagaacctagctgctcaaggtttcatccgcgcacgcatcgat ggtgaaacttgcgatctttctgatccaccgccgctagaattgcacaagaagcacaccata gaagtggttgtggaccgctttaaagttcgcccagatttgcagcaacgtttagctgaatcc ttcgaaaccacattggagctttctggtggtatcgccgttgttgctccaatggatggcgat ggcgaagaagtgatcttctctgccaactttgcttgtcctatttgcggttacagcatgcaa gagcttgagcctcgtttgttctcattcaacaacccagctggtgcgtgtggcacttgtgat ggtttgggcgtgcagcaatatttcgatccaagtcgagttattcaagatgaaacgcttagc ttggcacaaggtgcgattcgtggttgggatcaaaagaactactattacttccagatgctg acagcgctggcggatcattacggtttcgatcttcatgcgccatttaattctctgccaaag aaaacccaagacatcattcttaaaggatctgggcgtactgaagtcgagttcaagtacatt aacgaccgtggtgacattcgtgttaagcgtcatcctttcgaagggatcctgaatacactt gagcgccgttaccgcgataccgaatctaactcagtacgtgaagaacttgcgaaatacatc tctactaagtcttgttcaagctgtggcgctactcgtcttcgcctagaagctcgtaacgtc tttatcgccgatacgacactaccggagattgttgaactcagcatcgccgacgcattggaa ttcttccactctttgaagctcgaaggtcaacgcgcccaaatcgctgaaaaagtgatgaag gaaatcaatgatcgcctgcagttcttggttaacgtaggcttgaactacctcaacttatcg cgcagtgcagaaaccctatcgggtggcgaagctcaacgtattcgtttagcgagccaaatt ggtgctggtttagtgggtgtcatgtacgttctggatgagccatcaattggcctccaccag cgtgataacgaacgcctattgaaaaccctgacccacctaagagatttgggtaacacagta ttagtggttgagcacgatgaagatgcgattcgttgtgctgatcacgtgatcgatatcggt ccaggtgcaggtgtacacggtggtaacgtggtcgctgagggtacgatggacgagatcatc gccaatccgaactcactgactggtcagtacctcagtggtgcgaaagagattgcagtacca aaagagcgtacgccacgcgatccaaagaaaaccgttgaactacttggtgcgacaggtaac aacttaaagaatgtcgacctttccgttcctgttggcttgttcagctgtattacgggggta tctggttcaggtaagtcgactctgatcaacgataccttctttaagatcgcccatacccag ttgaacggtgcaacaactgcgcacccttcaccatacaaaacaatcaaagggttagagcac ttcgataaagttatcgacattgaccaaagtcctatcggtcgtacgccacgttcaaaccct gccacttacacaggcatatttactccgattcgtgaactttttgcgggcacgcaagagtca cgctctcgcggttacaagccggggcgctttagctttaacgtacgcggtggtcgctgtgag gcctgtcagggcgatggtgtaatcaaggtggaaatgcacttcctccctgacgtctacgtt ccttgtgatgtgtgtaaaggtaaacgctacaaccgcgaaacacttgaagtacgttacaaa ggcaagaccattgatgaagtactggaaatgacggtagaagatgcacgcactttcttcgat ccagtacctgctattgctcgtaagctgcaaactctgatggatgtaggtttgtcttacatt cgtttaggtcaagcagcaactacattgtcaggtggtgaagctcagcgtgtgaaactggct agagagctgtctaaacgtgataccggcaaaaccttatacattttggatgagccgacaact ggtctgcacttccacgatatccagcagctactaactgtactgcaccgtctgcgagaccac ggaaatactgttgtcgtcatcgaacacaacctcgatgttattaagacggcagactggatt atcgacttaggtcccgaaggcggacagggtggtggtgaaatcatcgcacaaggaacgcct gaagatgtgtctcagatcgaaggttcacacaccgctcgcttccttaagcctatgttgaag taa

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