Vibrio rotiferianus: BSZ04_10680
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Entry
BSZ04_10680 CDS
T05115
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vro03016
]
BSZ04_10680
Enzymes [BR:
vro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BSZ04_10680
Transfer RNA biogenesis [BR:
vro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BSZ04_10680
Prokaryotic type
BSZ04_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ASI95477
LinkDB
All DBs
Position
2:360540..361583
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AA seq
347 aa
AA seq
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MSDILSSLAYLTGKPVASAKIKAQPEHFQVREDLGFAFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGETPDFSAFLAQYPSIEILATDRH
NKKLRPGDLVGNEFVVTLSEVTDVTDVELRLEKVKQVGVPNYFGSQRFGNDGNNLEEARR
WGRENVRTRNQNKRSMYLSAARSWIFNRIVSARLEKGVFDKFIDGDFAQTSSGTQLVDAS
NIADLQAQFAEGQVAITAALAGDNALPTQADALTLEQPFLDEEPDLMALIRGNRMRHDRR
DIALKPQDLAWTVDGNNITLTFSLDAGSFATSIVRELVIEEKVEREY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacattttatcttcattggcttacctaacaggtaagccagttgcatctgcaaaa
atcaaagcgcaaccagagcactttcaggttcgcgaagatttaggttttgcctttacgggt
gaaggcgagcacttaatggttcgtatccgtaaaacaggtgagaacaccagttttgttgct
aacgaattagcaaaagcctgtggtgttaagtcgaaagacgttagctgggcgggccttaaa
gaccgtcatgcagtgaccgaacaatggctaagtgtgcatttaccaaaaggtgaaacgcca
gacttttcagcatttttggcgcaatacccaagcatcgaaatccttgcaacggatcgtcac
aataaaaaacttcgtccgggtgacctggtagggaacgagttcgtggttactttgtctgaa
gtgacagatgtgacggatgttgagctacgccttgaaaaagtgaagcaagtgggcgtgcca
aactactttggtagtcagcgttttggtaacgatggcaataacctagaagaagcacgtcga
tggggacgcgagaacgttcgtacccgcaatcaaaacaagcgcagcatgtacttgtctgca
gctcgttcttggatcttcaaccgtatcgtttcagctcgattagagaaaggcgtgtttgat
aagttcatcgacggtgattttgcgcagacaagttctggcactcagttggttgatgcaagc
aacatcgcagatctacaagcgcaatttgctgaaggtcaagtggcaattaccgcagctcta
gcaggtgataatgcgctgccaactcaagcggatgcccttactttagaacaaccattctta
gatgaagagccagacttgatggctttgattcgtggtaaccgtatgcgccatgaccgtcgt
gatattgcacttaaaccacaagacttagcttggacggtcgatggtaacaacatcacatta
acgttctcgctagatgcgggttcttttgcgacttcaatcgtgcgtgagttggtcatcgaa
gaaaaggtagaaagagaatactaa
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