Vibrio rotiferianus: BSZ04_11650
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Entry
BSZ04_11650 CDS
T05115
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vro
Vibrio rotiferianus
Pathway
vro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BSZ04_11650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_11650
Enzymes [BR:
vro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BSZ04_11650
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSZ04_11650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
Helicase_RecD
AAA_11
Viral_helicase1
SLFN-g3_helicase
UvrD-helicase
AAA_22
nSTAND3
AAA_16
UvrD_C
CbiA
DEAD
AAA_28
MukB
TrwB_AAD_bind
ResIII
DUF87
AAA_7
RNA_helicase
SRP54
T2SSE
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
ASI95648
LinkDB
All DBs
Position
2:591074..593233
Genome browser
AA seq
719 aa
AA seq
DB search
MKTNDLLSEQSSAMATPDLLATLESLANKGAIRQLDFQLARFIYSQVEQQVNSQELAFIA
GVLSSELGKGHICLPLFDGQGQPADLASKLGLFGESALTLNTQLQGVNWVELLQASPLVG
AQGEALPMMFDGERLYLHRYWHYEVTLADKLNQLSAAVNLQPQEFTRLSELLHHLFARQY
HFLFNALAKATEAGTSNQVLRQQLVCDHVDVVTVDSLDWSAIDAAVCQAKQVHDLQVLDK
LVPLSACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQAGQEKNLTIKLV
APTGKAAARLTESIGKAIQELPVEPELKAKIPTESSTLHRLLGAIPNSAEFRHNKQNPLH
LDILVVDEASMVDLPMMYKVVDALPKHARLILLGDKDQLASVEAGAVLGDICSFHAFGFG
KEQASAVAKLSGFDTLAYSTNSNASIADSLCMLQKSYRFDARSGIGQLAKAVNAGSAAKV
DDVWNRDFADIEHFALSSQNYNQMMQTLVAEYGRYLKRIGQQEIDQKTGESETLTHKAKA
VLDTFNQCRLLCAIREGDFGVTGLNQRIEKALAARKLIQTQDELWYHGRPVMVTRNDHGL
GLYNGDIGICMRDDSEGEPRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKSQGSEFE
YTLMILPPDFSPILTRELIYTGITRAKKRLAMYAEMNVLKRGIKVKTTRASGLVSRLSS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaatgatcttctttctgagcaaagcagtgcgatggcaacgccagatctattg
gcaacgttagaatcgctagcaaataaaggggcgattcgccaattggatttccagctcgcg
cgctttatctattcgcaagttgagcaacaagtgaacagccaagaactggcttttattgct
ggcgtgctcagcagtgaactggggaaaggacacatctgtttgcctttgtttgatggccaa
gggcaaccagcagaccttgccagtaagcttggtctgtttggagagtctgcgctgacgctt
aatactcagctgcaaggcgttaactgggttgagcttctgcaagcgtcgcctttggttggt
gctcaaggtgaagccttgccaatgatgtttgatggtgagcgtctctacttgcatcgttac
tggcactatgaagtgacgttggcggacaagctcaatcaactcagtgcggctgtaaacctt
cagcctcaagagttcacacgtttgtctgagttgctgcatcatttatttgctcgtcagtat
cactttttgttcaatgcattagccaaagcgacagaggcaggaactagcaaccaagtgcta
cgccagcagctagtctgtgaccatgtggatgtggtcactgtagacagtctcgattggtca
gccattgatgcggcagtctgccaagcgaaacaagttcacgatctgcaagtgctggacaaa
ctggtaccgttgtcagcttgtgtcaactggcagaaggtcgcggcagcggtagcactgacg
cgtcgttttgcggtgatttccggtggtccgggtacgggtaaaactactacggtaaccaaa
ctgcttgccgcattgattgagcaagcaggacaagagaaaaacctcaccatcaagctggtg
gcgccaacgggtaaagcggcagctcgtttgacggagtctattggtaaagcgattcaagag
ctgccagtggagcctgagcttaaagcgaaaattccaaccgagtcgagcactttgcatcgc
ctactgggcgcgatcccaaacagtgcagagtttcgtcacaacaaacaaaatccgctacac
ctcgatattttagtggtggatgaagcctccatggtcgatctgccgatgatgtacaaagtc
gtcgatgcgctaccaaagcatgcgcgtttgattcttctcggagataaagaccagttggca
tcggtagaagctggtgcggtgctgggtgatatctgttcgttccacgcattcggttttggc
aaagagcaggcgtctgcggtcgcgaagttatcaggctttgacaccttggcgtacagtacc
aacagtaatgcttcgattgccgatagcttgtgtatgctgcaaaagagttaccgattcgat
gctcgctctggtatcggccagctagcaaaagcggtcaacgctggctcagccgcaaaagta
gatgacgtttggaatcgtgattttgctgatatcgagcatttcgcactgagtagccaaaat
tacaatcagatgatgcagactttggttgccgaatatggtcgttatctaaaacgcatcggg
cagcaagagattgaccagaagactggggaatcagaaacgttgacccacaaagctaaagca
gtgctggatacctttaatcaatgccgattattgtgtgccatccgtgaaggtgattttggt
gtgaccggtttaaaccaacgcattgaaaaagcactagctgcacgtaagttgattcaaacc
caagacgagctttggtatcacggcaggccagtgatggtcacgcgtaacgatcatggcttg
ggattgtataacggtgatatcggcatttgcatgcgagacgacagcgaaggtgaaccgcgt
cttaaagtgttcttcgaattgccggatggcagcgtgaagtcggtgctgccaagccgagtg
cctgagcatgaaaccgcatatgcgatgaccattcataaatcacagggcagtgagtttgaa
tacacgctgatgattttgccgccagatttcagtccaattctcactcgcgaactgatctat
accggcattactcgcgccaagaaacgccttgcgatgtacgctgagatgaatgtcctcaag
cgcggtattaaagtgaaaacaacccgagcgagtgggttggtatctcgcttatctagttaa
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