Vibrio rotiferianus: BSZ04_12605
Help
Entry
BSZ04_12605 CDS
T05115
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vro
Vibrio rotiferianus
Pathway
vro05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
BSZ04_12605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vro03000
]
BSZ04_12605
Transcription factors [BR:
vro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BSZ04_12605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ASI95832
UniProt:
A0A2K7SU21
LinkDB
All DBs
Position
2:complement(784538..785413)
Genome browser
AA seq
291 aa
AA seq
DB search
MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFYHECSPLLQRLTSAAEEITDECRGASGKIKISAPYNLTKRMMMPMFNGFMRQYPDI
NIELTTESNADQLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPDYLSANPAPTHA
EELSNHSLLKGHPLLKWTLINSKGESVVNIERGRFQANALNVVRSACSDSLGITLMPDVM
IKEFIESGDLVRVLPDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatttgaacctgtttcgattagttgtcgaaaatgggagctataccgca
acttcgcgtaagaccatgattccggtggcaaccatcacccgacgtattcaggcgctagaa
gattcggttaacttgcgactgttaaaccgccatgcgcgaaaactgtctctaacagaagcc
ggagaacgtttttatcatgagtgttctccccttcttcaacgccttacttctgctgctgaa
gagatcaccgacgaatgccgtggtgcgtctggcaagataaagatatccgcgccatataat
ctgactaagcgcatgatgatgccaatgttcaatggttttatgcgccagtacccagatatc
aatattgaactgacaactgaaagcaatgcagatcaacttgatccgaccgaatgggatgtt
attttccgtgtaggccctcaacgtgattcgagtctaattgcacgtaagatcggcgaagtt
aaagatattttagtcgctagtcccgactacttatctgcaaacccggccccaactcatgca
gaagaacttagcaatcactcgctacttaaagggcaccctcttcttaagtggacgttgatt
aacagcaagggtgaatctgtcgttaacatcgagcgaggtcgcttccaagctaacgcgcta
aatgttgttcgtagcgcttgttcagacagccttgggattacgctaatgcctgacgtgatg
atcaaagaatttattgagagtggtgatttagttcgcgttctgccagattggagcgcaaac
ccgcgtgatatctacatgctttacaaccacaaagaccaccttcctgaaaaagtgcgctta
ttcattgatttcgtgatcgcttacaacattcactaa
DBGET
integrated database retrieval system
