Vibrio rotiferianus: BSZ04_13900
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Entry
BSZ04_13900 CDS
T05115
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_13900
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BSZ04_13900
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Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
DZR
DUF7577
zf-tcix
ERCC3_RAD25_C
AAA_16
AAA_30
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ASI96076
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Position
2:complement(1072178..1073929)
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AA seq
583 aa
AA seq
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MYTLRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYEGYGLKGSIFSAGLGRKETDQQVVFASVQSVVRNLDSFKNQFSLLVIDECHR
VPDEKTSSYQKVITHLRELNPGIKVLGLTATPYRLGMGWIYQYHTRGQVRTEELRFFHDC
IFELPIRYLLDENFLTPARMMDAPVLSYDFSQLKPANTGRYKEAEMDMVIDKAKRATPQI
VEQIIQYAKERKGVMVFAATVRHAQEIHGLLPEGETAIVIGDTPTPERDAIIQSFKNREI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSEGKSECLVLDYAGNSY
DLYQPEVGDPKPDSTSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDDETG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALIFECTEMD
LTVFKSSDGKSQLKVTYSGETYQGEGNALVHEFWSLNTKKQKQTFKDQFVRPHLADKHRP
FEEASPTKVVANQHRFRLPQFVIARKSGRFWKLRDKIFDDELR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtacacccttcgaccataccaagccgactctgtaaaagcggtgattcactattttcgt
aaacactccacaccagcggtcattgtgctgcctacaggtgcgggcaagagcttggtcatt
gcagagttagcaaggcttgccaagggccgcgtgttggtacttgctcacgtaaaagagctg
gtggaacagaaccacgccaagtacgaagggtatggtctaaaaggatcgatattctcagca
gggcttgggagaaaagaaaccgatcagcaagtggtttttgcctcggttcaatccgtggtg
cgcaatctggattctttcaagaaccagttttctttactggtcattgatgaatgccatcgc
gtgccagacgaaaaaaccagtagctatcaaaaagtgatcactcatctaagagagcttaac
cctggcattaaagttttgggcttaaccgcgaccccataccgcttaggcatgggctggatt
tatcagtaccacacccgtggacaggttcgaactgaagagttacgctttttccatgactgt
atcttcgagctccctattcgttacttactggatgaaaacttcttaacacctgctcgtatg
atggacgcccccgtcttatcttatgacttctcacaactaaagccagccaatacgggtcgc
tacaaagaagccgaaatggacatggtgatcgacaaagctaaacgtgcaacaccacagatc
gttgaacagatcattcaatacgccaaggaacgaaaaggcgtgatggtgtttgctgccaca
gttcgccatgcgcaagaaatccacggcctgttgccagaaggcgaaaccgccatcgtcatt
ggtgatacgccaacacccgaacgtgatgccatcattcaatcgttcaagaatcgtgagata
aagtacttggtcaacgtgtccgttctgaccacgggcttcgatgcgccacatgtggattta
atcgcgattcttcgccctaccgaatccgtcagtctatatcaacagattgtcgggcgtggt
ttgcgcctgtcggagggaaaatcggaatgtttagtactggattacgctggtaacagctac
gatttataccaacctgaagtcggtgatccgaagccagactccaccagcgagatcatcacc
atcccttgccctgcttgcggctttaataacaacttctggggtaagttagacagcaacggc
tttttgctagaacactttggtcgccgctgccaagggtattttgaagacgatgaaaccgga
gagcgcgaacactgtggttatcgctttagagcgaaatactgcggtgaatgtggcgctgat
aatgatattgcggcgcgtatttgtcatgaatgcgatgccacccttgtcgatccagacaaa
aaactcaaagaagcattaaacctgaaagatgcgctgatcttcgaatgtacagaaatggat
ttgacggtgtttaaatccagtgatggcaaatcacaactaaaagtgacgtactctggtgaa
acctatcaaggcgaaggcaatgcattggtgcatgagttctggtcactgaataccaaaaaa
cagaaacaaacttttaaagaccagtttgtgcgtcctcatcttgccgacaaacatcgtcca
tttgaagaagcatcaccaacgaaagtggtagcaaaccaacatcgtttccgtttacctcaa
tttgtgattgctcgtaaatcaggtcgtttctggaagttacgcgataagatctttgacgac
gaactaagataa
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