KEGG   Vibrio rotiferianus: BSZ04_13900
Entry
BSZ04_13900       CDS       T05115                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
vro  Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:vro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vro03400]
    BSZ04_13900
DNA repair and recombination proteins [BR:vro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     BSZ04_13900
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 SLFN-g3_helicase AAA_22 DZR DUF7577 zf-tcix ERCC3_RAD25_C AAA_16 AAA_30 FAD_binding_4
Other DBs
NCBI-ProteinID: ASI96076
LinkDB
Position
2:complement(1072178..1073929)
AA seq 583 aa
MYTLRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYEGYGLKGSIFSAGLGRKETDQQVVFASVQSVVRNLDSFKNQFSLLVIDECHR
VPDEKTSSYQKVITHLRELNPGIKVLGLTATPYRLGMGWIYQYHTRGQVRTEELRFFHDC
IFELPIRYLLDENFLTPARMMDAPVLSYDFSQLKPANTGRYKEAEMDMVIDKAKRATPQI
VEQIIQYAKERKGVMVFAATVRHAQEIHGLLPEGETAIVIGDTPTPERDAIIQSFKNREI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSEGKSECLVLDYAGNSY
DLYQPEVGDPKPDSTSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDDETG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALIFECTEMD
LTVFKSSDGKSQLKVTYSGETYQGEGNALVHEFWSLNTKKQKQTFKDQFVRPHLADKHRP
FEEASPTKVVANQHRFRLPQFVIARKSGRFWKLRDKIFDDELR
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgtacacccttcgaccataccaagccgactctgtaaaagcggtgattcactattttcgt
aaacactccacaccagcggtcattgtgctgcctacaggtgcgggcaagagcttggtcatt
gcagagttagcaaggcttgccaagggccgcgtgttggtacttgctcacgtaaaagagctg
gtggaacagaaccacgccaagtacgaagggtatggtctaaaaggatcgatattctcagca
gggcttgggagaaaagaaaccgatcagcaagtggtttttgcctcggttcaatccgtggtg
cgcaatctggattctttcaagaaccagttttctttactggtcattgatgaatgccatcgc
gtgccagacgaaaaaaccagtagctatcaaaaagtgatcactcatctaagagagcttaac
cctggcattaaagttttgggcttaaccgcgaccccataccgcttaggcatgggctggatt
tatcagtaccacacccgtggacaggttcgaactgaagagttacgctttttccatgactgt
atcttcgagctccctattcgttacttactggatgaaaacttcttaacacctgctcgtatg
atggacgcccccgtcttatcttatgacttctcacaactaaagccagccaatacgggtcgc
tacaaagaagccgaaatggacatggtgatcgacaaagctaaacgtgcaacaccacagatc
gttgaacagatcattcaatacgccaaggaacgaaaaggcgtgatggtgtttgctgccaca
gttcgccatgcgcaagaaatccacggcctgttgccagaaggcgaaaccgccatcgtcatt
ggtgatacgccaacacccgaacgtgatgccatcattcaatcgttcaagaatcgtgagata
aagtacttggtcaacgtgtccgttctgaccacgggcttcgatgcgccacatgtggattta
atcgcgattcttcgccctaccgaatccgtcagtctatatcaacagattgtcgggcgtggt
ttgcgcctgtcggagggaaaatcggaatgtttagtactggattacgctggtaacagctac
gatttataccaacctgaagtcggtgatccgaagccagactccaccagcgagatcatcacc
atcccttgccctgcttgcggctttaataacaacttctggggtaagttagacagcaacggc
tttttgctagaacactttggtcgccgctgccaagggtattttgaagacgatgaaaccgga
gagcgcgaacactgtggttatcgctttagagcgaaatactgcggtgaatgtggcgctgat
aatgatattgcggcgcgtatttgtcatgaatgcgatgccacccttgtcgatccagacaaa
aaactcaaagaagcattaaacctgaaagatgcgctgatcttcgaatgtacagaaatggat
ttgacggtgtttaaatccagtgatggcaaatcacaactaaaagtgacgtactctggtgaa
acctatcaaggcgaaggcaatgcattggtgcatgagttctggtcactgaataccaaaaaa
cagaaacaaacttttaaagaccagtttgtgcgtcctcatcttgccgacaaacatcgtcca
tttgaagaagcatcaccaacgaaagtggtagcaaaccaacatcgtttccgtttacctcaa
tttgtgattgctcgtaaatcaggtcgtttctggaagttacgcgataagatctttgacgac
gaactaagataa

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