Vibrio rotiferianus: BSZ04_15460
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Entry
BSZ04_15460 CDS
T05115
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vro03000
]
BSZ04_15460
Transcription factors [BR:
vro03000
]
Prokaryotic type
Helix-turn-helix
Other families
BSZ04_15460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
AAA_5
HTH_8
AAA_2
Mg_chelatase
AAA
HTH_30
MCM
AAA_3
nSTAND6
HTH_50
PAS_GdpP
AAA_19
HTH_29
HTH_7
Diguanyl_cycl_sensor
AAA_16
HTH_23
Sin3_corepress
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ASI96357
LinkDB
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Position
2:complement(1363145..1364908)
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AA seq
587 aa
AA seq
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MELQHITNSNWLSTSWDRSEQAGLKQRRRPDDIRVTSALLEDRRHQLHFLIDAVKQFALP
LFNQLFSHSDSRLILTDAEGVIIGSWGQPKFREKLTEIALSSGACWQEKLKGTNAIGTAL
VEAKPVSVIGDQHFIQHHRFISCSASPIFDHLGNLIGVLDITSEQKKHDFSTQVLVQNMV
QQVENQLLNQIPKGHIRVDLACEQGLLNSGWQGIIIANEEGQILAHNQVASQLLAQTNVV
GQSLASILDGSASNQYLVFKTQPLSEPKTQSRSISASNDLHYGDANVEHCWQQANRVIDK
DISLLILGETGVGKNEFVKALHKNSKRKNGPLVSVNCGALPKDLVESELFGYVSGAFTGA
NSKGYQGKIRQAHKGILFLDEIADLPLEAQSRLLHVLQDKTVLPVGSNQTIQVDTQIIAA
THKDLELLVDQGEFRQDLYYRLNGLIVELPRFEERSDKQALIENIHRRHSESKQSICPHL
LSLMLSYGWPGNLRELDSLVKVSALMAQGEPQLELSHVPNHLAKKLGQSPNIVDADTPNT
KDMRSTVEDKLVKTYQANQGNISKTSRMLGLSRNTIYRKLKSLGILK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcaacacattaccaacagcaattggctttccacttcatgggacagaagtgaa
caagcgggtttaaaacagcgacgtcgaccagacgatattcgtgtcacctcagcgttactt
gaggaccgacgccaccaactccacttcttaatcgatgccgttaagcaatttgccttgcct
ttgtttaatcaattgttctcccacagcgacagtcgattaatactgaccgatgccgaaggc
gtgatcattgggagctgggggcaacctaagttccgtgaaaagctgacagaaattgcgctt
agttctggcgcgtgttggcaggaaaaactcaaaggcaccaacgccattggcactgcgcta
gtggaagcaaaacccgtttccgtgattggtgaccaacactttatacaacatcatcgcttt
atcagttgctcagcgagcccgatctttgatcatttgggtaatttgattggtgtactggac
attaccagtgagcaaaagaagcatgacttttcaacacaagtcttagtgcaaaacatggtt
caacaggtagaaaaccaactcctcaatcaaattcccaaagggcatattcgagttgattta
gcctgtgaacaaggtctgctcaatagcggttggcaaggcatcatcatcgccaatgaagaa
ggtcaaattctggctcataaccaagtagcctcacaattgttggctcaaacgaacgttgtt
ggacaatcactggcatcgatactcgacggttctgccagtaatcaatatttagtgtttaaa
actcagccactctcggaacctaaaactcaatctcgctccatttcagcctcgaatgacctg
cattatggcgacgcaaacgtagagcactgctggcaacaagcgaatcgtgttatagacaaa
gacattagcttattgatccttggcgagacgggagtaggcaaaaatgaatttgttaaagct
ctgcacaaaaacagcaagagaaagaatgggcctttggtttccgtcaactgtggtgcgcta
cccaaagacttggtcgaatcagagctatttggctacgtgagcggagcattcacaggcgca
aacagcaaaggttaccaaggtaaaatccgtcaagcacacaaaggcatcttgtttttagat
gaaattgcagacttaccattagaagcgcaaagccgattgttgcatgtgctccaagacaaa
accgtattgcccgtaggctctaaccagaccattcaagttgatacgcaaatcatcgccgca
acacacaaagacttagagctattagttgatcaaggtgagtttcgtcaggatctttattac
cgactaaatggattaatcgtagaacttcctcgttttgaggagcgcagtgataagcaagcg
ctgattgaaaacattcatcgccgccactctgaatcaaagcaaagtatttgccctcacctg
ctgtcactgatgttgagttatggttggccggggaacctgcgtgagctcgatagcttagtc
aaagtctctgctttgatggcgcaaggtgaaccccaacttgagcttagccacgtccccaac
catctggctaagaagcttggtcaatcacccaatattgtcgatgctgatacaccaaacact
aaagacatgcgttctactgtagaagataagctggtaaaaacctaccaagcaaaccaaggc
aacatcagcaaaacttcgcgtatgctcgggctaagtcgcaataccatttatcgcaagctt
aaaagccttggtattctcaagtaa
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