Vibrio rotiferianus: BSZ04_17015
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Entry
BSZ04_17015 CDS
T05115
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vro
Vibrio rotiferianus
Pathway
vro03030
DNA replication
vro03430
Mismatch repair
vro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSZ04_17015
03430 Mismatch repair
BSZ04_17015
03440 Homologous recombination
BSZ04_17015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vro03032
]
BSZ04_17015
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_17015
Enzymes [BR:
vro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSZ04_17015
DNA replication proteins [BR:
vro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSZ04_17015
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSZ04_17015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
ASI96648
LinkDB
All DBs
Position
2:1748464..1749183
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AA seq
239 aa
AA seq
DB search
MIKKLFQKPSIQWPMKFQQKLERATDERLIAFYGTELPAPDTPLSRVEFVALDFETTGLN
PQKNGIITIGLVPFNLNRIFLRQAKHWKVRPQEKLDEDSVIIHGITHSELIDAPDLGDIL
DELLPSLAGKVVVVHYRRIEREFLNQALQVRIGEGIEFPVLDTLQIEEDIQQRLSGGLWN
KLKGNKPGSLRLAQSRRRYGLPDYTPHHALTDAIATAELLQAQIAHHYSADQPISSLWL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaagttatttcaaaaaccttccattcaatggccaatgaagtttcagcaaaaa
ctggaaagggcaacagatgagcgtctaatcgccttttatgggacagaactacctgcgcca
gacacgccactatctcgagtagagtttgtcgcgctcgatttcgagaccacggggctcaac
ccacagaaaaatggcatcatcacaattggtctagtgcccttcaatctcaatcgaattttt
ttgcgccaagccaagcactggaaagttcgaccacaagagaagttggatgaagactctgtc
attatccatggtatcacccacagcgaacttattgatgcacctgatcttggcgatattctt
gacgagcttctgccaagcctagctggcaaggtggtggtcgttcactatcgtcgcatagag
cgagagtttctcaaccaagcgcttcaagtacgtattggtgaagggatagagtttccagtc
ttagatacgcttcaaatcgaagaagacatccagcagagactctctggggggctttggaac
aagttgaaaggtaataaacccggctcactgcggctagcacaatctcgtcgtcgttatggg
ctgccagactacacaccacaccatgctttgacagatgccatcgccactgcagagctactg
caagcacagatcgcccatcactatagtgctgaccagcctataagcagcttatggttgtag
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