Vibrio rotiferianus: BSZ04_17080
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Entry
BSZ04_17080 CDS
T05115
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vro01002
]
BSZ04_17080
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vro01011
]
BSZ04_17080
Peptidases and inhibitors [BR:
vro01002
]
Cysteine peptidases
Family C82
BSZ04_17080
Peptidoglycan biosynthesis and degradation proteins [BR:
vro01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BSZ04_17080
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ASI98022
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All DBs
Position
2:complement(1762284..1763813)
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AA seq
509 aa
AA seq
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MVPFFSFSTVVSQNATADTEQVGAVAQLSIEKMIHYPEVIDRLYQSTSYRLNWENEDIAQ
QFLFQLQVLSLAEVSPVFQDQIRRVAYVKEEGDALDYDLVMTDTLLMYLSYLEQVQEHGL
QWLFGQTEEVSLPEPSIEVLTALSTEITIGKLEQFLINLSSPLQSDPAFNQSFYSLQDYA
KLDYPTYQQQGLARVGDVLENKPILLERMQVVGIDVDDLLYSGPQFDEELEMAIKAFQKI
HGLKQDGIIGPNTIRWVNFSPEQRLHLLALNSERSRLWAKERDNVVFVNVPGYEVTYWHN
GEALFESKVVVGRTTRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVKKNPMYLLEQN
IQIIRSWDSSEIIDPTTIHWASVNPRSFPYRMRQSSGSHNALGLYKFNMPNPQAIYLHDT
PSKNLFQEDRRAFSSGCVRVENAEQLAELLFKTQGLEERLEKKRESGREANTSVPLSERI
QVHIIYQTAWLEEGMLYYRDDIYRYDHQG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgtttttcagcttttctactgttgtttctcaaaacgccactgctgatacagag
caggtgggagcggttgcacaactatccattgagaaaatgatccattacccagaagtgatt
gatcggctctaccagagcaccagctatcgcttaaattgggaaaacgaggatattgcacaa
caattcttgtttcaattgcaagtattgtctcttgctgaggtttctccagtatttcaagac
caaatcagacgagttgcttatgtaaaagaagagggagatgctcttgattatgatttagtc
atgacagatacgctactcatgtacctaagctatttagagcaagtccaagaacatggctta
caatggttgtttggccaaactgaagaagtgtcattgcctgaacctagcatagaagtactt
accgctttaagcaccgaaattaccattggtaagttagagcaatttctcatcaatttatct
tcaccgctgcaatccgatcccgctttcaatcaatctttttattcgctccaagactatgcc
aagcttgattacccgacctaccagcaacaaggtttagcgagggtaggtgatgtgctagaa
aataagcccatactccttgagcgaatgcaggtcgttggcatcgatgtcgacgatttactt
tatagtggtccacaatttgatgaagagttggagatggcgataaaagcattccagaaaatt
catggtctaaagcaggacggaattatcggtccaaacaccattcgttgggttaatttttcg
cctgagcagcgattgcatctacttgcacttaactcagaacgttctcgtttgtgggcaaaa
gaacgagacaatgtcgtgtttgttaacgtgccagggtatgaagtgacatactggcataat
ggtgaagcattatttgagtctaaagtcgttgtaggccgaacaactcgaaaaacacctatc
atgacggggactcttgattctgtcatccttaaccctacatggaatgtaccttggaagatt
atggtgaaggacatcattccaaaggttaagaaaaacccaatgtacctacttgagcaaaat
attcagataattcgctcttgggattcaagcgagatcattgatcctacgacgatacattgg
gcttcggttaacccgcgtagctttccttatcggatgagacaatcttctggatctcataac
gcgttaggcttgtataagtttaatatgccaaaccctcaggctatttatttacatgacacg
ccgagcaaaaacttgtttcaagaagatagacgtgctttcagttcgggttgtgtaagagta
gaaaacgcagaacagctggccgagctgttgtttaagacccaaggccttgaagaacgtcta
gagaaaaaacgtgaaagtggtagagaggcgaatacctcggtgcccctgagtgaacgtatc
caggtacatattatttatcagacagcttggttagaagaaggcatgctgtactatcgagat
gacatttatcgttacgatcatcaaggttga
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