Vibrio rotiferianus: BSZ04_18095
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Entry
BSZ04_18095 CDS
T05115
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vro03032
]
BSZ04_18095
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_18095
Enzymes [BR:
vro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSZ04_18095
DNA replication proteins [BR:
vro03032
]
Prokaryotic type
DNA Topoisomerases
BSZ04_18095
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSZ04_18095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ASI96845
UniProt:
A0A2K7SXT1
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Position
2:complement(1996931..1999558)
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AA seq
875 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGEKKAAAISTKGMSPE
EKARVKKEKDRKALIKKMGINPYHDWEANYQILPGKEKVVSELQKLAKDADHVYLATDLD
REGEAIAWHLREIIGGDEERYKRVVFNEITKNAIQQAFQTPGELNMDGVNAQQARRFMDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREINAFIPEEFWDINANTHTKDKTA
FKLLVAQKDGVAFKPVNETETKAALSVLEKASYEVCKREDRPTKSKPSAPYITSTLQQAA
STRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVDAVRGFIGSEYGDKYLPAKPL
TYGSKEGAQEAHEAIRPSDVSVKSEDLQGVDADAHKLYSLIWNQFVACQMTPAEYDSTTI
SVKAAEYTLKAKGRILKFDGWTRVQRPMGKNEDTILPAVQLGEKLDLESLEPKQHFTKPP
ARFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVEQRRFYAEKMGEIVTDRLDDSF
NDLMNYDFTARMEQKLDQIAEGDVMWKDVLDNFFTDFTGDLEKAEQDENEGGMKLNHIVM
TDIECPTCSRPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEDGIINVLEEDVETAA
LRAKKRCPICETAMDAYLIDDKRKMHVCGNNPNCEGYIVEHGEFKVKGYDGPVVECDKCG
SDMVLKNGRFGKYMDCTSETCKNTRKILKNGEVAPPKEDPVHFPELPCENSDAYFVLRDG
ASGLFMAASNFPKSRETRAPLVSELARFEERLPEKFKYLATAPQEDPDGRPAVVRFSRKT
KENYVRSEENGKPSGWTALYNEGKWDITDKRKKAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactcgttatagtggagtcaccagccaaggcaaagacgataaacaagtac
cttggtaaagactttattgttaagtctagtgttggtcacgtgcgtgatctccctacggcc
ggtcaaagcactggtgagaaaaaagccgcggcaatttctacaaaaggaatgagcccagaa
gaaaaagcgcgagtcaaaaaagaaaaagaccgtaaagctttgatcaaaaaaatggggatt
aacccatatcatgactgggaagcgaactaccaaatccttccaggtaaagaaaaagttgta
agcgaactgcaaaaattagccaaagatgctgaccacgtctatctcgcaaccgatttggac
cgcgagggggaagcaatcgcatggcaccttcgtgagatcatcggtggcgatgaagagcga
tacaaacgcgtagtttttaacgagattactaagaatgcaatccaacaagctttccaaaca
cctggtgagctgaatatggatggtgttaacgcacagcaagcacgtcgattcatggaccga
gtagtaggtttcatggtttctccattgctatggaagaaagttgcgcgtggtctttcagca
ggtcgcgtacagtcggtagcggtgaagctgttggttgagcgcgagcgtgagattaatgct
tttattccagaagaattctgggatatcaacgcaaatacgcacactaaagacaagacagca
ttcaaacttcttgttgcgcaaaaagatggcgttgcgtttaagcctgtcaacgagacagag
accaaagcagcgctttcagtactggaaaaagcgagctacgaagtttgtaagcgtgaagac
cgcccaacaaagagtaagccgtctgcaccgtacatcacttcaacactgcaacaagcggca
agtactcgtcttggctacggcgttaagaagacaatgatgctcgcgcagcgtttgtatgaa
gcgggttacatcacctatatgcgtactgactcaaccaacttgagtgcggaagcagtagat
gcggttcgtggattcatcggctctgagtatggagacaagtaccttcctgctaaaccgcta
acgtacggtagcaaagagggcgcacaagaagcgcacgaagcgattcgtccttcagatgtt
tctgtgaaatcagaagacctacaaggtgttgatgcggacgcacacaaactttattcattg
atctggaatcagttcgttgcctgtcaaatgacgccagcagaatacgattcaacgacaatc
agtgtgaaggcggcagaatacacgctaaaagcgaaaggccgtatcctcaagtttgacggt
tggactcgcgtacaacgcccaatgggtaaaaacgaagatacgattcttccagccgttcag
ttaggcgaaaagctagacctagagtcactagagcctaaacagcactttactaagccacct
gcacgttttacagaagcggcattggttaaagagcttgagaagcgcggcattggtcgtcct
tcaacttacgcttctatcatctctacgatccaagatcgcggctatgtgaaagttgagcaa
cgtcgtttctacgcagagaagatgggcgagatcgttacagaccgcctagacgacagcttt
aacgacctaatgaactacgacttcacagctcgtatggaacagaagcttgaccaaatcgca
gaaggcgatgtgatgtggaaagatgtcctagacaacttcttcaccgacttcactggcgat
cttgagaaagcagaacaggacgaaaacgaaggcggcatgaagctgaatcacatcgtgatg
acagacatcgagtgtccgacttgtagccgtccaatgggtatccgtactgcatctacgggt
gtattccttggctgttctggttatgcattaccacctaaagagcgttgtaagacaacgatt
aacttgggtgacgaagatggcatcatcaatgttctagaagaagatgtggaaactgcagcg
ctgcgcgcgaagaagcgttgtcctatctgtgaaacggcgatggatgcgtacctgatcgac
gataagcgtaagatgcacgtttgtggtaacaacccgaactgtgaaggctacatcgttgaa
cacggcgagttcaaagtgaaaggctacgatggcccagttgttgagtgtgacaagtgtggc
tctgacatggtgcttaagaacggtcgcttcggtaaatacatggactgtacgagtgagacg
tgtaagaacactcgtaagattctgaagaatggagaagttgcgcctccgaaagaagatcca
gttcatttccctgaactgccatgcgaaaactcagatgcgtactttgttctacgtgatggt
gcttctggcctgtttatggcagcaagtaacttccctaaatcacgtgaaactcgtgctcca
ttggtatctgaactggcgcgttttgaagaacgtttgcctgaaaagttcaaatatttagca
acagcaccgcaggaagatccggatggtcgcccagctgtagttcgatttagtcgtaaaact
aaggagaactatgtgcgttctgaagaaaacggaaaaccaagtgggtggaccgctctttat
aacgaaggcaagtgggatatcactgataagcgtaagaaagcgaagtaa
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