Vibrio rotiferianus: BSZ04_18280
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Entry
BSZ04_18280 CDS
T05115
Name
(GenBank) lipid ABC transporter permease/ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vro
Vibrio rotiferianus
Pathway
vro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BSZ04_18280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vro02000
]
BSZ04_18280
Enzymes [BR:
vro01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
BSZ04_18280
Transporters [BR:
vro02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BSZ04_18280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
APS_kinase
AAA_30
AAA_22
AAA_25
RsgA_GTPase
AAA_29
Zeta_toxin
ABC_membrane_2
AAA_24
SLFN-g3_helicase
DEAD
G-alpha
ATPase
nSTAND3
MMR_HSR1
TniB
AAA_15
AAA_18
TMCCDC2
Motif
Other DBs
NCBI-ProteinID:
ASI96881
LinkDB
All DBs
Position
2:complement(2039465..2041213)
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AA seq
582 aa
AA seq
DB search
MSINTDETTWQTFKRLWQFIRLYKSGLIVAVIALVINAISDTYMISLLKPLLDEGFGNAE
SDFLRTLPLIVFAMMFIRGVSGFVSTYCLSWVSGNVVMQIRRMVFNHFMHMPVSYFDKEK
TGNLLSRITYDSEQVSAATSSALVSIVREGASIIGLLVLMFYNSWQLSLVLFAVAPVVAF
GISVVSKRFRKISRNMQTMMGNVTASAEQMLKGHKVVLSYGGQDIEGKRFEKVSNQMRQQ
SMKLVTAQAAANPIIQMIASIAIVVVLYLASIDSIKEQLTPGTFTVVFSAMFGLMRPLKA
LTNVTSQFQRGMAASQTLFALVDLEPEKNEGKFTVERANGDVSVQDVSFTYQGAEKPALE
NVSFDIPRGKTVALVGRSGSGKSTIANLFNRFYDVSGGSITLDGHDIRDYELKNLREQFA
LVSQNVHLFNDTIANNIAYATEGKFTNEDIERAAKLAHAMEFISKMDGGLDAMIGENGAS
LSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKDKTVLVIAHRLS
TIENADEILVVDEGAIVERGNHADLIAKDGAYAQLHRIQFGA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataaatactgatgaaacgacctggcagacgtttaaacgtctttggcaatttatt
cgcctttataaatcaggtcttatcgttgccgttattgcattagttattaatgctatttct
gatacctatatgatttccttgctaaaaccgcttcttgatgaaggttttggtaatgcggag
tcggactttcttcgaacacttccgctgattgtttttgccatgatgtttattcgtggtgtg
agtgggtttgtttccacatattgtttgagctgggtgtcaggcaatgtggtgatgcaaatt
cgccgtatggtgtttaatcactttatgcatatgcccgtgtcttactttgataaagaaaag
acgggtaatctactttctcgtattacttacgactcggagcaagtgtctgcggctaccagc
tctgcgttagtaagtattgtgcgtgaaggcgcgagcatcatcggtttgctggttttgatg
ttctataacagctggcaattgtctttggttttgtttgctgtcgctcctgttgtagctttt
ggtattagtgttgtttctaagcgatttagaaagatctcgagaaacatgcagaccatgatg
ggcaatgtgacggcttcggcagagcaaatgctgaaaggtcataaagttgtactaagctac
ggtggtcaagacatcgaaggcaaacgctttgaaaaagtcagcaaccaaatgcgccaacaa
agcatgaagttagtgacagctcaagcagcggcaaacccaatcattcaaatgatcgcgtct
attgcaattgtcgtggtgctatatctagcaagtattgattcaatcaaagagcaactgact
ccgggtacgtttaccgttgtattctcagcaatgtttggtttgatgcgtccgcttaaagcg
ctaacaaatgtaacctcacagttccaacgtggtatggcagcgagccaaactttattcgcg
ttggtagacctagagccagaaaagaacgaaggtaaatttacagtcgagcgcgcgaatggt
gatgtttcggtacaagatgtgagttttacttaccaaggggcagagaaaccagcgctcgaa
aacgtcagctttgatattcctcgtggtaagacggtggcgttggttggccgttcaggctca
ggtaagagtaccatcgcgaacttgttcaaccgtttttacgacgtcagcggtggctctatt
acacttgatggccatgacattcgtgactatgagttgaagaacctacgagagcagttcgct
ttagtttctcaaaacgtccatctatttaacgataccatcgcaaacaatattgcttacgcg
acagaaggtaagttcacgaatgaagatattgaacgagcagcgaaattagctcatgcgatg
gaatttatcagtaagatggatggcggactcgatgcgatgatcggtgagaatggcgcgagt
ttatctggtggtcagcgtcaacgtgtagccattgctcgagctttattacgtgacgcgcca
gttctgattcttgatgaggcaacgtctgctctagataccgagtctgaacgtgcaatccaa
tctgctctggacgaactacagaaagacaaaactgtattggtgattgcacaccgactgtcg
acgattgagaatgctgatgaaatcctagtggtggatgaaggtgcgatcgttgaacgtggt
aaccatgctgatttgattgctaaagacggagcatacgctcagcttcatcgaatccaattt
ggtgcttaa
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