KEGG   Vibrio rotiferianus: BSZ04_18625
Entry
BSZ04_18625       CDS       T05115                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
vro  Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:vro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vro03032]
    BSZ04_18625
   03036 Chromosome and associated proteins [BR:vro03036]
    BSZ04_18625
   03400 DNA repair and recombination proteins [BR:vro03400]
    BSZ04_18625
DNA replication proteins [BR:vro03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BSZ04_18625
Chromosome and associated proteins [BR:vro03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BSZ04_18625
DNA repair and recombination proteins [BR:vro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BSZ04_18625
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 ACP_syn_III_C DUF7342
Other DBs
NCBI-ProteinID: ASI96942
UniProt: A0A2K7SYK7
LinkDB
Position
2:complement(2112258..2112530)
AA seq 90 aa
MNKTQLVEKIAENADISKASAGRALDAFIEAVGGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPSFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaaactcaattagtagaaaaaatcgcagaaaatgcagacatctctaaagcgtca
gctggccgtgctctagatgcattcatcgaagctgttggtggcacactgcaatcaggtgac
caagttgctttagttggcttcggtacttttagcgttcgcactcgtgcagctcgcactggc
cgtaaccctaagactggtgaagagatccaaatcgcagaagcgaaagttccttcattcaaa
gctggtaaagctctaaaagatgcttgtaactaa

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