Vibrio rotiferianus: BSZ04_19045
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Entry
BSZ04_19045 CDS
T05115
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vro03016
]
BSZ04_19045
Enzymes [BR:
vro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BSZ04_19045
Transfer RNA biogenesis [BR:
vro03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BSZ04_19045
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ASI97017
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All DBs
Position
2:complement(2213444..2214562)
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AA seq
372 aa
AA seq
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MNYQIITKNKDLEQVCALAREADVVMLDTEFVRVRTYYPQLGLIQLFDGKQLSLIDPTEL
TDMSSFVELLKDTSVLKVLHACGEDLEVFQNAFDCTPFPMVDTQLMAAFLGHGLSTGFAT
LVEEYLGVELDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYEKLFDKVTEAGWWEAVQ
QESDLLVSKRIRNTNPDNAYLDIKGAWQLKPRELAILKPLATWRYREALKRDLALNFIFK
EGDLLTVARLGLTSFKKMEAEGIDIRAINRHGARIAAIVKQAKLTPADEYPATIERLMDY
PGYKQIFKNMKDVVKVASQKSGLATEFLASKKQINQIISWVWKKDRDPARLPDVMQGWRL
ELLGEKMDKILK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatcaaattattactaaaaacaaagacctagaacaagtttgcgctctagctcga
gaagcagatgtcgttatgttggatactgagtttgtccgtgtaaggacttactatccgcag
ctaggcttgattcagcttttcgatggcaagcaactttccctaattgacccaactgaactt
accgacatgagttcatttgttgagttacttaaagacacctcagtacttaaagttctacac
gcatgcggtgaagatctagaagtcttccaaaatgcctttgattgcacgccattcccaatg
gtggacactcagcttatggcggcgtttcttggccatggactttcaaccggttttgcaacg
ctagtcgaagaataccttggtgtggaactggataagagtgaatctcgcaccgattggatg
gcacgtccattaacacaaaagcagcttgattatgccgccgcggatgttcactacttgctg
cctctctatgagaagttgttcgataaggtgacggaagcaggctggtgggaagctgttcag
caagaaagcgacctactggtttctaaacgtattcgtaatacgaacccagacaacgcctac
cttgatattaaaggcgcttggcagctaaaacctcgtgagttagccattcttaagcctctt
gcaacttggcgttaccgcgaagcactaaagcgcgatcttgcgctgaactttatcttcaaa
gaaggggacttgctcacagtggcacgccttggcctgacgagtttcaagaagatggaagcc
gaaggtattgatattcgcgcaatcaatcgtcatggtgcgcgtatagcggctatcgtcaag
caagcgaagctcactccagccgatgagtaccctgctactattgaacgtttgatggattac
cctggctacaagcaaatcttcaagaacatgaaggacgtagtgaaagtagcgtctcaaaaa
tctggcttagcgaccgagtttttggcgtcgaaaaagcagattaaccaaatcatcagttgg
gtttggaagaaagatcgtgatccagcgagactaccggacgtgatgcaaggttggcgtcta
gagttgctcggtgagaagatggataagattctcaagtaa
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