Vibrio rotiferianus: BSZ04_20180
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Entry
BSZ04_20180 CDS
T05115
Name
(GenBank) lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vro01011
]
BSZ04_20180
Enzymes [BR:
vro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BSZ04_20180
Peptidoglycan biosynthesis and degradation proteins [BR:
vro01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BSZ04_20180
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Phosphonate-bd
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ASI97211
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All DBs
Position
2:2442043..2443647
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AA seq
534 aa
AA seq
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MQISQFNRFKRSALLFASVLLLSACQIESEPKSEFELIQERGVLRVGTLNNQLSYYIGPD
GPAGLDYELARKFAEQLGVKLEIKPAFRQAELFPALKKGDIDIIATGLNQTSQAVQRFRP
GPAYYYVSQQVVYKKGQLRPRDIDQLISYQESKDDKAEDKEANAGAETLQIVEQSQFVPT
LTTLQKEYPELQFEIVGDADTRDLLKQVSTGELRFTVTDSVELSLAQRLYPDLAQAFELT
EDQPVSWFTRRSEDESLYAMLIEFFGGIKQSGELATLEEKYIGHIEAFDYVDTRAFIRAL
DNTLPKWAPLFQKYSEEFDWRLIAALAYQESHWKPAAKSPTGVRGMMMLTLPTAKSVGVT
NRLDPEQSVRGGVEYLRRIVARVPDSINEHEKIWFALASYNVGYGHMMDARRLTKAQGGD
PNSWADVKERLPLLRQKRFYSQTRYGYARGDEARNYVENIRRYYQSIIGHVSQKPAIDED
TDDLQVIPPLNPDLLISGAVETLAEQVSGAVEATSNTEGSSLQGTEQTPAQKAE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataagtcagttcaaccgattcaagcgcagcgccctacttttcgcctctgtgctt
ctactttctgcctgccagattgaatcggagcctaaaagtgagtttgagctaatccaagaa
cgtggtgttctgcgagttggcactctcaacaaccaactttcctattacattggtcctgat
ggccctgctggcctggattacgaactggcgcgcaagtttgctgaacagttaggtgttaag
ttggaaatcaaacctgctttccgacaagctgagttattccctgccctgaaaaaaggtgat
atcgatatcatcgcgacaggtttaaaccaaacctctcaagcggtacaacgcttccgccct
ggccctgcttattactacgtcagtcaacaagtagtgtataagaaaggtcaactgcgccca
cgcgatattgaccagctaatcagctatcaagaatctaaagatgacaaagcggaagataaa
gaagccaatgccggtgcagaaacgctacaaatcgttgaacaatcacaattcgttccaaca
ttaactacgctacaaaaagagtaccctgagcttcaatttgaaattgttggtgatgcggat
actcgcgatctattaaaacaagtatctacaggtgaactccggtttaccgtgactgattcg
gtagagttatctttagctcagcgactttatcctgaccttgcacaagcctttgagttaaca
gaagaccagccagtgtcttggtttacacgccgatctgaagatgaaagcttatacgcaatg
ttgatcgagttctttggcggcatcaaacagtctggtgaactagcaacattagaagagaag
tacattggtcatattgaagcgtttgattatgtagatactcgagcctttattcgagcactg
gacaacaccttgcccaaatgggcaccactgttccagaaatacagtgaagagtttgattgg
cgcttaattgccgcgttagcttaccaagagtcacattggaaaccggctgcaaaatcacca
acaggtgtgcgaggcatgatgatgttaacactgccgacagcaaaaagtgttggcgtaact
aaccgccttgatcctgaacagtcagtacgtggtggtgttgagtatctacgccgtatcgtg
gcccgcgtaccagattcaatcaatgagcatgagaagatttggtttgcattagcatcgtat
aatgtcggttatggtcacatgatggatgctcgaagattaacgaaggcacaaggtggcgat
ccaaattcatgggcagatgtgaaagagcgtctaccgttgctgcgtcagaagcgtttctac
agccaaactcgttacggttatgctcgtggcgatgaggcacgtaactacgttgagaatatt
cgtcgttactaccaatcgatcattggccacgtgagccaaaaacctgcgattgatgaagat
accgacgacctacaagtaataccaccgctcaatcctgatttgctaatttcaggagcggta
gagacactcgctgaacaagtttcaggcgcggttgaagccacatcaaatactgaagggagt
tcacttcaagggacagagcaaacgcctgctcaaaaagcagaataa
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