Vibrio rotiferianus: BSZ04_20990
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Entry
BSZ04_20990 CDS
T05115
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vro
Vibrio rotiferianus
Pathway
vro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSZ04_20990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_20990
Enzymes [BR:
vro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BSZ04_20990
DNA repair and recombination proteins [BR:
vro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSZ04_20990
Prokaryotic type
BSZ04_20990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASI97358
LinkDB
All DBs
Position
2:complement(2618248..2618928)
Genome browser
AA seq
226 aa
AA seq
DB search
MNQLPTWHDVIGEEKQQSYFVDTMNFVDAERAAGKAIYPPAKDVFNAFRFTEFNDVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIEGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQQGVVFLLWGAHAQKKGRFIDRNKH
HVLTAPHPSPLSAHRGFFGSKPFSQANQILVQQGKEAINWHLPMTV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttacccacttggcacgatgtgatcggcgaagaaaaacagcagagctacttt
gtcgataccatgaattttgttgacgcagagcgagcagcaggcaaagccatctatccgcca
gccaaagacgtgtttaacgcgttccgttttactgaattcaatgacgttaaggtagtgatt
ctagggcaagacccttaccatggtccaaaccaagcacatggtttgtgcttctctgtgttg
cctggtattaaaacgccaccatctttggtgaatatgtacaaagagttggcgcaagacatc
gaaggttttcaaattcctcaacatggctttctacaaagctgggctgaacaaggggtgttg
ctactcaatacagtgttgacagtagagcagggcaaagcacactcacattcgaaaaccggc
tgggaaacctttactgaccgcgtgattgaggccattaaccagcatcaacaaggtgttgtg
ttcctgttatggggggcccatgcgcagaaaaaaggtcgctttatcgaccgcaataagcat
catgtattgaccgctccgcacccgtcaccattatctgcacaccgtggtttctttggtagc
aagccattctcgcaagcaaaccaaatccttgttcaacaaggcaaagaagcgattaattgg
catttgccgatgacggtgtaa
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