Vibrio rotiferianus: BSZ04_21810
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Entry
BSZ04_21810 CDS
T05115
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vro03009
]
BSZ04_21810
Enzymes [BR:
vro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BSZ04_21810
Ribosome biogenesis [BR:
vro03009
]
Prokaryotic type
rRNA helicases
BSZ04_21810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
ALMT
CMS1
AAA_30
Helicase_C_2
PRAI
UPF0180
UvrA_inter
SLED
Motif
Other DBs
NCBI-ProteinID:
ASI97515
LinkDB
All DBs
Position
2:complement(2808300..2809679)
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AA seq
459 aa
AA seq
DB search
MSKQTFDQVGLNPALLETLESLNYTHMTPIQALSLPAILNQRDVIGQGKTGSGKTAAFGL
GVLSNLNVKRFRVQSLVLCPTRELADQVAKEIRTLGRGIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLEKGRINLEELNTLVLDEADRMLEMGFQDALDAIIDAAPKQRQ
TLLFSATFPEKIEQIAQRIMQSPEMIKVESTHDTSSIAQYFYNVEGSEARDEALANLLLT
HQPESAVVFCNTKKEVQNVADELHHKGFSVVDLHGDLEQRERDQALVQFANKSVSILVAT
DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGLAFSFFGEKDGLRVARIEE
YLDMDVVPATLPAKSTQQPYQAKMVTINIDGGKKQKVRAGDILGCLTGKNGITGAQVGKI
QLMAMRSYVAVEKSVAKKALQTISNGKMKGRQFRARILK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacaaacttttgaccaagtagggcttaatccagcgctactagagacgcttgaa
tcattgaattacacccatatgacgccaattcaagcgttgagcttacctgcgattttgaat
cagcgtgatgtgattggtcagggtaaaaccggctcaggtaaaacggcggcatttggtctg
ggcgtattatccaacctaaacgtgaagcgcttccgtgtacaatctttggtgttgtgtcca
acgcgtgaactggctgatcaggtggcaaaagagatccgtacgttaggtcgtggtattcac
aacattaaagtactgacactgtgtggcggcatgccaatgggaccgcaaatcggttcacta
gagcatggtgctcatattctggtgggtacgccaggtcgtattcttgatcacctagagaaa
ggtcgcattaacctagaagagctaaacacgctggttctagatgaagcagatcgcatgctg
gaaatgggcttccaagacgccctcgatgcgatcattgatgctgcgcctaaacaacgtcaa
acactgctattcagtgcgactttcccagagaagatcgaacagattgctcaacgtattatg
caatcaccagagatgatcaaagtagaatcgacacatgatacgtcgagcatcgcgcaatac
ttttacaacgttgaaggttcagaagcacgcgatgaagctctggcaaacctactactgacg
caccagccagagtcagcagtagtgttctgtaataccaagaaagaagtacagaatgtggca
gatgaactgcatcacaaaggcttcagtgtggtggaccttcatggcgatctagaacaacgt
gaacgcgaccaagctctggtacagtttgctaacaagagtgtgtctatccttgttgcaaca
gacgtggcggcgcgtggtttagacgtcgacaaccttgatgcagtatttaacttcgaactg
tctcgtgaccctgaagtacacgttcaccgtattggtcgtactggtcgtgcgggcagcaaa
ggtctggcgttcagcttctttggtgagaaagatggtctacgtgtagctcgtattgaagag
tacctagatatggatgtggtaccagcaacactgccagcgaaatcaactcagcagccatac
caagcgaagatggtgacgattaatatcgatggcggtaagaaacagaaagtacgtgcgggt
gacatccttggctgtttgactggtaaaaatggtatcacgggtgcacaagtgggtaagatc
cagctaatggcaatgcgttcttatgttgcggtagagaaatctgtggcgaagaaagcactg
caaaccatcagtaacggtaagatgaaaggtcgtcaattccgtgctcgtattctgaagtaa
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