Vibrio rotiferianus: BSZ04_22400
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Entry
BSZ04_22400 CDS
T05115
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vro
Vibrio rotiferianus
Pathway
vro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSZ04_22400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_22400
Enzymes [BR:
vro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BSZ04_22400
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSZ04_22400
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSZ04_22400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
Zn_ribbon_IS1595
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ASI97622
LinkDB
All DBs
Position
2:complement(2915098..2915907)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVEVSRMGISPHMLGQTIKAFVFRTPKLRWDIPQELKKLEGQVIRNISRRAKYLL
IETDEGSAIVHLGMSGSLRVLDADFPAGKHDHVDLKLLNGKILRYNDPRRFGAWLWSAPN
ESHAVLDNMGQEPLTEEFNADYVAEKAQSKRVAVKQFIMDNKVVVGVGNIYANESLFKSH
IHPIRPAGKLTQEEWQRLVKNIKLTLEVAINQGGTTLKDFAQADGKPGYFAQELQVYGKE
GEPCPECGTIIETVKIGQRNTFFCPQCQQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgaagttagccgaatggggattagtccgcatatgcttggg
caaacaatcaaggcatttgtgttccggaccccgaaactgcgctgggatattcctcaagaa
cttaaaaagctagaggggcaggtgattcgcaatatcagtcgccgcgcaaagtacctattg
attgaaacggatgagggtagcgcgattgttcacttaggaatgtcgggatcattgcgcgtg
ttagatgctgattttccggctggtaaacatgatcatgtcgaccttaagttactcaatggc
aagatattacgctataacgaccctcgacgttttggggcatggctgtggagcgctcccaat
gagtcacatgcggtattagataatatggggcaagagcctttaacggaagagttcaatgcg
gattacgtggcggagaaagcccaaagtaagcgtgttgcggttaagcagttcattatggac
aataaagtggtggtgggggtaggtaatatttacgccaacgagtctttgtttaagtctcat
atccacccaattcgccctgctggcaagttaacccaagaggagtggcagcgtttagtaaaa
aacatcaagctgacactcgaggtggcgataaaccaaggtggcactacgttaaaagacttc
gctcaagctgatggtaagccaggatattttgcgcaagagcttcaagtttatggtaaagag
ggagagccatgtcctgaatgtggtacgattatcgaaaccgtaaaaatagggcaaagaaat
acgtttttctgtcctcagtgtcagcagtaa
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