Vibrio rotiferianus: BSZ04_22560
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Entry
BSZ04_22560 CDS
T05115
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
vro
Vibrio rotiferianus
Pathway
vro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BSZ04_22560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_22560
Enzymes [BR:
vro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSZ04_22560
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BSZ04_22560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
RecG_dom3_C
ResIII
tRNA_anti-codon
AAA_30
SecA_DEAD
SNF2-rel_dom
HHH_5
SLFN-g3_helicase
Cdd1
PhoH
IstB_IS21
BrxC_BrxD
nSTAND3
DNA_pol_lambd_f
Helicase_RecD
IMS_HHH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASI97652
LinkDB
All DBs
Position
2:2948146..2950227
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AA seq
693 aa
AA seq
DB search
MSAQMLSAVPLTSLSGVGAKVAEKLAKVGLHSVQDLLFHLPLRYEDRTRIYPIAKLHAGL
WAAVQGKVMAVDTTFGKRKMLTVKISDGNGTITLRFFNFTAAMKNNFSNGKLVHAYGEIK
RGGMGLEIVHPDYKFYVSEQKPDVEQSLTPVYPTTDGLRQITLRNLTEQALSLLDKAAVQ
ELLPSGLYNHQITMSQALHTIHRPPPTINLDEFDEGKHPAQIRLIMEELLAQNLSMLAVR
SKGQQDVALPLASCDSLKKQLLAQLPFSPTNAQARVVKEIEADLEKTHPMMRLVQGDVGS
GKTLVAALAAVRAIEHGYQVALMAPTELLAEQHAINFANWFEKMGIQVGWLAGKLKGKAK
EAELARIASGEAKMVVGTHALFQEHVEFHHLALVIIDEQHRFGVHQRLELREKGAKQGAY
PHQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDDIVERVRNACL
NEGKQAYWVCTLIDESEVLEAQAAADTAEELQRKLPDVKIGLVHGRMKPAEKQAVMQDFK
DNKLHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHS
PLSKTAQKRLGVLRESNDGFVIAQKDLEIRGPGELLGTKQTGLADFKIADLVRDQRLIPE
VQRIARHIHDNYPTNATAIIDRWLGERDIYSKA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccaaatgttatctgctgttcctttaacttctctgtctggggttggcgctaaa
gtcgcagaaaaactcgccaaagttggtttgcatagcgttcaagatctactgtttcacctt
cctcttcgttacgaagatcgcactcgcatttacccaatcgccaaactgcatgctgggctt
tgggcggcggtacagggcaaagtcatggctgtcgatactactttcggcaaacgcaaaatg
ctgacggtaaaaatcagcgacggcaatggcaccattaccctacgcttttttaactttact
gccgcgatgaagaacaatttctcgaatggtaagttagtacacgcttacggtgaaattaag
cgtggcggtatgggcttagaaatagttcaccctgactacaagttttatgtaagtgaacaa
aagccggatgtggaacagagtttaacccccgtttatccaaccaccgatggattgcgtcaa
atcactttgcgtaacctgacggaacaagctttatcactcctcgataaagccgcagtacaa
gaattgctaccttctggtttgtacaatcaccagataaccatgtcgcaagcgctgcatacg
attcatcgtccaccgccaactattaatttggatgagtttgatgaaggcaagcaccctgct
caaattcgtttgatcatggaagagttactggcgcagaacctctctatgttggcagtgcgc
agcaaagggcaacaggacgttgcattgcctttggcgtcgtgcgactcactgaaaaagcaa
ctactggctcaattgcccttctcgccgaccaatgctcaagcacgagtcgttaaagaaatt
gaagctgacttagaaaaaacgcacccaatgatgcgccttgttcaaggtgacgtaggctcg
gggaaaactttagttgctgcgcttgctgccgtcagagccattgaacacggctatcaagtc
gctttaatggcaccgaccgaactgctcgccgagcagcacgcgattaacttcgctaattgg
tttgagaaaatgggcattcaggtcggttggcttgcaggcaaattgaaaggtaaagccaaa
gaagccgaactagcccgaattgccagtggtgaagcgaaaatggttgtgggcactcacgcc
cttttccaggagcatgttgagttccatcatcttgctttggtcattattgatgaacagcac
cgctttggcgtccaccagcgcttagaactacgagagaaaggcgcgaaacaaggcgcttat
ccacatcagctcatcatgacagcaacgccaattccgcgaacattagccatgacagcttat
gctgacttagaaacgtcggtgattgatgagttaccgccaggtcgaacaccaatccagacc
gtcgcgattccagacactaaacgcgatgatatcgtcgaacgagtgcgcaatgcttgctta
aacgaaggcaaacaagcgtattgggtatgtaccttaattgatgagtccgaagtcttggag
gctcaagccgccgccgacactgcagaagagctgcaacgtaaacttcctgacgtaaaaatt
ggtctcgtgcacggacgaatgaaacccgcagagaagcaagcggtgatgcaagacttcaaa
gacaacaagctgcatttgctagtcgcaacgaccgtgattgaagttggcgtagacgtaccc
aattctagcttgatgatcatcgagaacccagagcgtttaggtttagctcagttgcaccag
cttagaggtcgtgttggtcgaggttcagtggcaagccattgtgtgttgctgtatcactcg
ccactatcaaaaaccgcgcaaaaacgtttaggcgtattacgtgaaagcaacgacggcttt
gtgattgcacagaaagacttagagattcgtggcccgggcgaacttcttggtaccaaacaa
actggcttggcagattttaaaattgccgacttggtgcgagatcagcgcttaattccagaa
gttcaacgcattgcgcgccacattcatgacaattacccaactaatgcaacagcgatcatt
gaccgttggctaggtgaacgcgacatttactccaaagcgtaa
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