Vibrio rotiferianus: BSZ04_22805
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Entry
BSZ04_22805 CDS
T05115
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vro
Vibrio rotiferianus
Pathway
vro03030
DNA replication
vro03410
Base excision repair
vro03420
Nucleotide excision repair
vro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSZ04_22805
03410 Base excision repair
BSZ04_22805
03420 Nucleotide excision repair
BSZ04_22805
03440 Homologous recombination
BSZ04_22805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vro03032
]
BSZ04_22805
03400 DNA repair and recombination proteins [BR:
vro03400
]
BSZ04_22805
Enzymes [BR:
vro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSZ04_22805
DNA replication proteins [BR:
vro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSZ04_22805
DNA repair and recombination proteins [BR:
vro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BSZ04_22805
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSZ04_22805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
tRNA-synt_1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASI97701
LinkDB
All DBs
Position
2:complement(3004915..3007707)
Genome browser
AA seq
930 aa
AA seq
DB search
MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFASDRIAV
VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICIPGVEADDVIGT
LAYQASQQGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVVEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLTKLYENLDDIAALGFRGSKTMAKKLVDNK
DNAMLSYELATIKLDVELDGMPESLLKAEPSTDELIKLYGQLTFKSWLNELLEGGTGVVE
ADESTGAARGGSASSKADMDTSAVKIDRSQYETILDEASFNAWLDKLKASELFAFDTETD
SLDYMVANLVGLSFATDEGIAAYVPVAHDYLDAPQQLDRDWVLAQLKPILEDEAQAKVGQ
NLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAGK
GKNQLTFNQIELDEASPYAAEDADVTLRLHNRLSANIDQDEKLKTVYEEIEMPLVPVLSR
IERTGVLIDDMKLGAQSVEIAARLEELEQKAYEIAEQEFNMNSPKQLQAILFEKMGLPVI
KKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPSTGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFIAPTGYKILAVDYSQIELRIMAHLSD
DQALLDAFRHGKDIHAATAAEIMGVAIEDVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGI
PRGEAQAYMDKYFERYPGVMQYMEDTRSAASAQGYVETIFGRRLHLPEIQSRNGMRRKAA
ERAAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESSLSEIES
KVQNLMESAAELKVPLVADAGHGDNWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattcctgaaaatccgttgattctgatcgacggctcttcttatctatatcgc
gcttttcacgcttaccctggcacgatgagtaacggtgaaatcccaactaacgctgtttac
ggtgtggtgaacatgttacgcagcatgatgcgccagttcgcttctgatcgtatcgcggtg
gttttcgatgcgaagggtaaaaccttccgtgacgatatgtacccggaatacaaagcgaat
cgcccaccaatgccggatgatcttcgttgccagattgaaccactgcacaacgtcattcgt
gccatgggtctgcctctaatctgtattcctggtgtagaggccgatgatgtgatcggtact
ctggcttatcaggcatcgcagcaaggcatgcctgttttgatcagtactggcgataaagat
atggcgcagttggtggatgacaacgttaccttgatcaacaccatgaccaacgtcgtgatg
gatcgcgaaggtgtcgttgagaagtttggtatcccaccagaattgatcatcgactaccta
gcgttgatgggcgataaagttgataacattcctggcgttccgggtgtcggtgacaaaacc
gcaacggctctgctacaaggcattggcggtctgacaaagctgtacgaaaaccttgatgat
atcgctgcacttggcttccgtggctcgaaaaccatggcgaagaagctagtcgacaacaaa
gacaatgccatgctgtcttacgagcttgccaccatcaagcttgatgtggagctggatggg
atgccagaatcattgctaaaagcagaaccaagcacagatgagctgatcaaactgtacggt
cagttgacgtttaaatcttggctaaatgagctcttagaaggcggcacaggcgtggttgaa
gcggatgaatcaactggcgcagcgcgtggtggttctgcttcatctaaagccgatatggat
acctcagcggtaaaaatcgaccgtagccaatacgaaaccatcctagatgaagcttcattc
aatgcttggttagacaaactaaaagcatcggagttattcgcgtttgatactgaaaccgac
agcctagattacatggtggcaaacttggttggtttgtcatttgcaacagatgaaggcatt
gctgcttatgtaccagtggctcacgactacctagatgcgccgcagcaactggatcgtgat
tgggtattggcacagctaaagccgattcttgaagatgaggctcaagctaaagtcggtcag
aacctaaaatacgacgcgtcggtgctggctcgctacggtattgagatgaaaggcatcaag
cacgacaccatgttggcgtcttacgtatacaacagtgttggcggtaaacacgatatggac
agcttggcactgcgattcctgcagcacagctgtatttcattcgaacaaatcgcaggcaaa
ggtaagaaccagctaaccttcaaccaaattgagcttgatgaagcttctccatacgcggca
gaagatgcggacgtgacacttcgtctacacaaccgtctatcggcgaacatcgatcaagat
gaaaagctaaaaacggtttacgaagagattgaaatgccactcgtgccagtgttgtctcgt
attgagcgcactggtgtgctgattgatgacatgaagttgggcgcgcagtcggtagaaatc
gcagctcgtcttgaagagcttgagcaaaaagcctacgagattgcggaacaagagttcaac
atgaactcacctaagcagctgcaagcaatcctatttgagaaaatgggtctaccagttatt
aagaagacgccttcaggtacgccttctaccaatgaagaagtgctgcaagagctggctttg
gactacccactaccaaaactgattttggagtaccgtggtctggcgaagctaaaatccaca
tacactgacaaattgccgaagatgatcaatccatcaacgggtcgtgtacacacgtcttat
catcaagcggtaaccgcaacgggtcgtctatcatcgaccgatcctaacttgcagaatatc
ccaattcgtaacgaagaaggtcgccgtattcgccaagcatttattgctcctacggggtac
aagattctggctgtcgactactcgcagattgaattgcgtattatggcgcacttatcggat
gaccaagcgctgcttgatgcattccgccatggcaaagatatccatgcggcaacggcagca
gaaatcatgggcgttgcaattgaggatgtttcaagcgagcagcgtcgtcgcgcaaaagcg
gttaactttggccttatctacggcatgagtgcatttggtttggcgaagcagctaggtatt
ccgcgtggtgaagcacaagcgtacatggacaagtactttgagcgttacccgggcgtgatg
caatacatggaagacacgcgcagtgctgcttctgcccaaggatatgtagaaactatcttt
ggtcgtcgcctgcacctgcctgaaatccaatcgcgtaacggtatgcgccgtaaagcggca
gagcgtgcagcgatcaacgcaccaatgcaaggtaccgcagcggatatcatcaagaaagcg
atgctactggttgatcagtggattcaagaagaaggcaacggtcgtgtgaaacttctgatg
caagtgcacgatgaattagtgtttgaagttgaagagtcgtctttgtccgaaattgaaagt
aaagtacagaatttgatggaatctgcagcagagctgaaagtgcctctagtcgctgatgct
ggtcatggtgataactgggatcaagcacactag
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