Vibrio rotiferianus: BSZ04_23865
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Entry
BSZ04_23865 CDS
T05115
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vro
Vibrio rotiferianus
Pathway
vro00300
Lysine biosynthesis
vro00470
D-Amino acid metabolism
vro01100
Metabolic pathways
vro01110
Biosynthesis of secondary metabolites
vro01120
Microbial metabolism in diverse environments
vro01230
Biosynthesis of amino acids
Module
vro_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BSZ04_23865
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BSZ04_23865
Enzymes [BR:
vro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BSZ04_23865
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASI97875
UniProt:
A0A2K7SSP3
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All DBs
Position
2:3220661..3221914
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AA seq
417 aa
AA seq
DB search
MDYFNYQDDGQLWAEDVSLQALAEQHGTPLYVYSRATLERHWNAFDSAVGQHPHLVCYAV
KANSNLGVLNALARLGSGFDIVSGGELERVIAAGGDAKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNKVAGELGVVAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
AVYQFAQSLPNLNVQGIDCHIGSQLTEIEPFIDATDRLLALIDDLKTQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGVLLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVAPREGEAQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQREELTSLWQLEQILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaactatcaggatgatggccagctttgggccgaagacgtctcactccaa
gcacttgccgagcaacatggcactcctctttatgtttactcacgtgcgacgctggagcgt
cactggaatgcgtttgatagcgctgtgggtcagcatcctcatcttgtttgttacgcagta
aaagcaaactctaaccttggcgtattgaatgcattggctcgtttgggttcaggctttgat
attgtatcgggtggtgagcttgagcgtgttatcgcggcaggcggtgatgcgaagaaggtg
gtgttctcgggtgttggtaaaacgccagcagagatgaaacgcgcactggagctgggcatt
aaatgcttcaacgtggaatcagaacctgagcttgagcgcttgaacaaagttgcgggtgag
ctaggtgtggttgcaccgatttctctacgaattaaccctgacgtagacgcaaaaactcac
ccttacatttcgactggtctgcgtgataacaaatttggtatcgcttttgatcgtgctccg
gcggtttatcaattcgcccagagcttaccaaacctaaatgtacaaggtattgactgtcat
attggttctcaactgactgagattgaacctttcattgatgcaacagatcgtctattagca
ctgattgatgacttgaaaacacaaggtatcaacattcgtcacctagacgtaggtggtggc
ctgggcgtggtatatcgtgatgaattgccgccacagccttcagactacgcaaaagcacta
ctaggtcgtcttgagaatcatcaagatcttgaactgattttcgaacccggccgtgcgatt
gctgccaacgcaggggtcttgctcacacgtgtggagtttctcaaacacacagagcacaag
aactttgccattatcgatgcagcaatgaacgacttgatgcgtccggcactataccaagcg
tggcaagatattgtcccagtcgcaccacgtgaaggtgaagctcagacttacgacttagtg
ggcccgatctgtgaaacgggtgacttcttgggcaaagatcgagcactagtactgcaagaa
ggtgatctactcgcggttcgctctgcaggtgcctatggctttgtgatgtcttcgaactac
aatactcgtacccgagctgcagaagtaatggtggatggtaaacaaagccaccttgttcgc
cagcgtgaggagctgaccagtttgtggcagctggaacagattctaccggagtaa
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