Vibrio rotiferianus: BSZ04_23925
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Entry
BSZ04_23925 CDS
T05115
Name
(GenBank) histidine kinase
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vro
Vibrio rotiferianus
Pathway
vro05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
BSZ04_23925
Enzymes [BR:
vro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
BSZ04_23925
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GFIT
Motif
Pfam:
EAL
HDOD
Motif
Other DBs
NCBI-ProteinID:
ASI97886
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All DBs
Position
2:3233251..3234474
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AA seq
407 aa
AA seq
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MNTTYVARQPIFNRKRQTLGYELLFRDGERNAYPSHIDSNRATYRLIVENFLSVGTNPVI
ASSRCFINFPHQSLVRRLPRSLPKNKIVIEVLETCRPTDDLLDAIREFYREGYLIALDDF
TLTQEWRRFLPYVHIVKLDIMAMGLDKACELVKSHLEKRVKYHFLAERVETEEEFEATKE
AGFKFFQGYFFSQPLISQTKYVSPEQVLALKLFREVCVPDPDFDRIESIITQDVALSYKL
LRFVNTQSSNLEVAITSFRQALIYLGQEKLKMFVSLVVASYISSNKPRELYNLSLQRAQF
CQLMSSYQPFSHLNEQGFMVGLLSILDAMLDLSVDSLVEQLPLSPALKQALLHREGAYGA
LIALEECYERADWNGVEKFSQQLGLSFDDVKSQLGEAVRLSQTFVGA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacgtatgtcgctcgccagccaatctttaaccgtaaaagacagacgctgggc
tatgaattgttattccgtgatggtgagcgcaatgcttacccttctcatatagattcaaat
cgagcgacataccgacttatcgtcgagaactttctttctgtcggcactaaccctgttatt
gcttcatcacgctgctttatcaattttcctcatcaaagcttggtgcgcagattgcctcgc
agcttacccaaaaacaaaattgttattgaggtgctggagacatgtcgtccaactgatgac
cttctagatgcaattcgagagttctatcgagaaggttatttaattgctctagatgacttt
acgttgactcaggagtggcgtcgatttttgccttacgtccatatagtgaaactcgacatt
atggctatgggcctagataaggcatgcgaactagtcaaaagtcatttagagaaaagagtt
aagtaccactttctcgcagagcgagttgaaactgaagaagaatttgaagcgactaaagag
gctggctttaagtttttccaagggtacttttttagtcagccactaatatcccaaacgaag
tacgtcagtcctgagcaggttcttgccctgaagctgtttcgtgaagtatgtgtaccagac
cctgattttgatcggattgaaagtatcattactcaagatgtcgcgttgtcgtacaagttg
ttgcgctttgtaaatacacaatcaagcaatcttgaggtcgctattacctcttttcgccaa
gcattgatttatttggggcaagagaagcttaagatgtttgtctcgttggtggtggcatct
tatatctcgagtaacaaacccagagaattgtacaatctgtctttgcaacgtgcgcaattt
tgccagttgatgtctagctaccagccattttcgcacctcaatgagcaaggctttatggtc
gggctattgtcaattcttgatgccatgctcgatttatcagtagattctcttgtagagcag
ctaccacttagccccgctttaaaacaagcgcttttgcatcgagaaggcgcttatggagca
ctcattgccctagaagaatgttacgaacgtgctgactggaatggtgtggaaaaattctct
caacagcttgggctctcctttgacgatgttaagtctcagcttggtgaagcggtgcgcttg
agccagactttcgttggcgcataa
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