Vibrio rotiferianus: BSZ04_24090
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Entry
BSZ04_24090 CDS
T05115
Name
(GenBank) ligand-gated channel
KO
K16092
vitamin B12 transporter
Organism
vro
Vibrio rotiferianus
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vro02000
]
BSZ04_24090
Transporters [BR:
vro02000
]
Other transporters
Pores ion channels [TC:
1
]
BSZ04_24090
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ASI97917
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Position
2:3262484..3264358
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AA seq
624 aa
AA seq
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MRKTLLAITCASLLSPTFYSQAQQASADETVVVTANRFQQIDGAVLAQTVTVTKEDIQRL
QANSLFDVFRTLPSVEVAQYGGRGQSASIYVRGGSSSQVLVLVDGVRMPRAIMGGIDFNQ
FPINSIERIHYIRGARASIYGSEAISGVINIITRASINDDSGRVSAGYGSNNHKKGTFVV
SKPVGEGKHFKGVLGYEKTDGFNVKPLPGVNDGDEHGFETLNLKLGYQQNFSNNLSGYVG
LSAYNNEYDYDNSSYGNPAWGTVDKHEKKTGEVEYVGADLSLEYNRDVYSSELKLAYGQQ
DNYDHKSGQSKSTGDHVAIEQFNAIWLNSYSINEELSVGGGLDYRTEKLAKGYIAPSDWG
PAKDYDPEKNPRTNFGVSAIAQYAYDVWTLEASVRNDDNNQFGNNTTWQTAAGWKFYQGY
ELTLSHGTAFRAPSFVDLYYPGYEMPNLKPEESENTELSLSGAVSIVDWTVTGYYNQIEN
MLIWEGAGMQNVGEAEIKGVELEVKFDTDIVSHEFYLDYKDPVDKSGAEDTQLAYRSKRG
AKWNAYATFDQWTLGSQYLYQGERFSGSTRLPSYSLWNFTASYAVSPNWDINAKLSNAFD
KDYEMYVGYATPGRQYFVSADYRF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaactcttcttgcgatcacgtgtgcatcgctgctttcacctactttttattca
caggcccaacaagcctccgcagacgaaacggttgtggttaccgcaaaccgattccagcaa
attgatggtgcggttctcgcacaaactgttacggtaaccaaagaagacattcaacgtctt
caagcaaatagcctatttgatgtgttccgtacactaccgagtgttgaagttgcccagtac
ggtggacgtggtcaatctgcatctatctacgttcgaggtggtagttcatcccaagttctg
gttttagtagatggtgtacgtatgccacgcgctatcatgggtggtatcgactttaaccaa
tttccaatcaactcgattgaacgtatccactacattcgtggtgcgcgtgcttctatttac
ggttctgaagcgatttctggcgtaatcaacattattactcgtgcgtctattaatgacgat
tcaggtcgagtgtctgcaggttatggctcaaataaccataaaaaaggcacgtttgtggtc
tctaaacctgtaggcgaaggtaaacactttaagggcgtgctaggttacgaaaaaaccgat
ggttttaatgttaaacctttgccgggtgtgaacgacggtgatgagcacggctttgaaacg
ctcaaccttaaactaggctaccaacaaaacttctctaataacttatctggttacgttggg
ttgagtgcttataacaatgagtacgactacgataacagtagctatggtaaccctgcgtgg
ggaacggttgataagcacgaaaagaaaaccggtgaagttgagtatgttggcgcagacctg
tcgttggaatataacagagacgtttactcatctgaattgaaactggcttatggtcagcaa
gacaactatgaccataaatcaggtcaaagcaaatcaaccggcgatcatgttgctattgaa
cagttcaacgcaatttggctgaactcgtacagtattaacgaagagttgagcgttggtggt
ggtttggactaccgtactgagaagctagccaagggctatattgcaccaagtgactgggga
ccagctaaagactacgatccagaaaagaacccaagaaccaactttggtgttagcgctatt
gctcaatacgcttatgacgtctggacgttagaagcgagtgtacgtaatgacgacaacaac
cagtttggtaataacaccacgtggcaaaccgcagcgggttggaagttttaccaaggttat
gagttgacgctgagtcacggtacggccttccgcgccccgagctttgttgatttgtattat
ccaggctacgaaatgccaaacctgaaaccggaagagtcagaaaatactgagctatcgtta
tcgggtgctgtatctattgttgattggacggtaacgggttactacaaccaaattgaaaac
atgctgatctgggaaggtgcgggcatgcaaaacgttggtgaagccgaaattaaaggtgtg
gagttagaggtgaaattcgatacagatatcgtttctcacgagttctacttagattacaaa
gaccccgtcgataaatctggtgcagaagatactcaactagcttaccgctctaagcgcggt
gccaaatggaacgcttacgcgacgtttgaccaatggacgctaggttcacagtatctatac
caaggcgagcgctttagtggcagtacaagattgccgagctacagcctatggaacttcacc
gcgtcttacgcagtaagcccaaactgggacattaatgcgaagctaagcaacgcctttgat
aaagattacgagatgtatgtgggctacgcgacaccagggcgtcagtactttgtctcggcg
gactaccgcttctaa
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