KEGG   Vreelandella sp. SM1641: V8F66_02180
Entry
V8F66_02180       CDS       T11229                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
vrs  Vreelandella sp. SM1641
Pathway
vrs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    V8F66_02180 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vrs03400]
    V8F66_02180 (sbcB)
Enzymes [BR:vrs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     V8F66_02180 (sbcB)
DNA repair and recombination proteins [BR:vrs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     V8F66_02180 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     V8F66_02180 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      V8F66_02180 (sbcB)
SSDB
Motif
Pfam: ExoI_SH3 ExoI_C RNase_T HTH_20
Other DBs
NCBI-ProteinID: XBY59310
UniProt: A0AAU7XP40
LinkDB
Position
454267..455760
AA seq 497 aa
MAPPNAASASFLWHDYETFGADPRRDRPAQFAALRTDADLNEIGEPIELYCKPADDYLPH
PAACLITGITPQKAQRHGLPEAEFAGDIQRHMSEPGTCVVGYNSLRFDDEVSRHLFYRNL
LDPYSREWQNGNSRWDLIDVVRAFYALRPTGIEWPLREDGAPSFKLEHLTAANGIAHEGA
HDAVADVRATIALARLLKERNAKLFDYLLGLRGKRAVAKQLDLPNAKPLLHISRRYPASR
GCSALVMPLAEHPTNPNGVIVYDLSVDPGDMLSMSVEQIRGRVFVSQQDLAEGDVRIPLK
VIHINRCPVVFPASALKDVDGPQKGEYGSIVERLGLDVTACRQHWKTLRDASGVAEKVAE
VFNAGYEDAPQDPDLMLYSGSFFSAADRQQMERVREMEPWDLVGQRFAFQDPRLEEMLFR
FRARSYPDTLEGEEREQWEAYRWMRINDPALAGFTLKAFAREIAQYNQQTLTDRERQILE
ELVMFVEAMMPAQAFDA
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggcgccacccaatgctgcctctgccagttttctttggcatgattatgaaaccttcggg
gctgacccgcgtcgcgaccggcccgcacagtttgccgcgctgcgcactgatgccgatctc
aatgagattggtgagcccattgagctttattgcaaaccggccgatgactatttaccccat
cctgcggcctgtttgattaccggcattaccccccaaaaagcccagcgccatggtctcccc
gaagctgaattcgcgggagatattcagcgccatatgagtgagccaggcacctgcgtagtc
ggctacaacagcctgcgctttgatgacgaagtgtcccgccacctgttttaccgcaatctg
ctcgacccttattcccgcgagtggcaaaacggcaattcccgctgggatttgattgatgtg
gtgcgcgctttttatgcgttgcgccctacgggcatcgagtggccgctgcgtgaagatggc
gcacccagttttaagcttgagcacttaacggcagcgaacggcattgcccatgaaggagct
catgacgcagtggccgatgtgcgcgcaacaatcgccttggcgcgtcttctcaaagagcgc
aatgcgaagctgtttgattacttgctcggcctgcgcggtaagcgtgcggtggctaaacag
ctcgacttgcccaatgccaaaccgctactgcatatttcccgccgttatcccgctagccgt
ggctgtagcgccctggtgatgccgttggctgaacacccgaccaaccccaacggggtcatc
gtttacgacttaagcgttgatcccggcgatatgcttagtatgtcggtggaacagattcgt
ggccgtgtgtttgtaagccagcaagatttggcagaaggcgatgtacgcattccgctgaaa
gtgattcatatcaaccgctgcccggtggtctttcctgccagtgccttaaaagatgttgat
gggccgcaaaaaggtgagtatggctctatcgttgagcgtttaggcttggatgtgacggcc
tgtcggcagcattggaaaaccctacgtgatgccagcggtgtggctgagaaggtcgcagag
gtatttaacgcaggctatgaagatgcgccgcaagaccctgatctaatgctctattctggc
agcttcttttccgccgctgaccgccagcagatggagcgtgtgcgtgaaatggagccgtgg
gacttggtggggcagcgttttgcgttccaagatccacgcttggaagagatgctgtttcgc
tttcgtgcgcgtagctaccccgacaccttggaaggcgaagagcgtgagcagtgggaggcg
tatcgctggatgcgcattaatgaccctgcgctagcgggctttactttaaaggcgtttgcg
cgggagatcgctcagtacaatcagcaaacgcttactgatcgcgagcggcagattctggaa
gaactggtcatgttcgtcgaagccatgatgccagctcaggcgtttgacgcctga

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