Vreelandella sp. SM1641: V8F66_02530
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Entry
V8F66_02530 CDS
T11229
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vrs Vreelandella sp. SM1641
Pathway
vrs03030
DNA replication
vrs03430
Mismatch repair
vrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V8F66_02530 (dnaE)
03430 Mismatch repair
V8F66_02530 (dnaE)
03440 Homologous recombination
V8F66_02530 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vrs03032
]
V8F66_02530 (dnaE)
03400 DNA repair and recombination proteins [BR:
vrs03400
]
V8F66_02530 (dnaE)
Enzymes [BR:
vrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V8F66_02530 (dnaE)
DNA replication proteins [BR:
vrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V8F66_02530 (dnaE)
DNA repair and recombination proteins [BR:
vrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V8F66_02530 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
OB_POT1A
Herpes_IR6
Motif
Other DBs
NCBI-ProteinID:
XBY59377
UniProt:
A0AAU7XPA1
LinkDB
All DBs
Position
525765..529271
Genome browser
AA seq
1168 aa
AA seq
DB search
MTVPFVHLRLHSEYSLVDGLVKLKSLVSTTAERAMPALALTDETNLFGLVKFYKAAQGAG
LKPIIGSDLWLQNPHDESHPYRLTLLAMNDVGYRNLTELISKGWTHGQRQGRAILDKQWV
LEQSEGLIALSGAREGEIGRHLLSDHEPEARQLLEEWQAAFPERFYLELVRTGRPLEEAC
VHASVKLAIETGTPVVATNDVRFLERDDYWAHETRVAIGEGKALDDPRRERRYTEEQYLK
SPDEMAALFADIPEALENSVMIAERCSVNVRLGEIFLPEFEIPEGMTQDEFFRKVSHDGL
TDRLDFLFPAERYPRDSDEYKAIDQRYRDRLEFELNVIIQMGFPGYFLIVMDFIQWAKDN
SVPVGPGRGSGAGSLVAYAQKITDLDPIGYDLLFERFLNPERVSMPDFDVDFCMEKRDKV
IEYVAERYGRNAVSQIVTFGTMAAKAVVRDVARAQGRPYSLGDKLSKLIPFEVGMTLAKA
IEQEPALKEFIGNDEEAEEIWEMALKLEGTTRGTGKHAGGVVIAPTKLTDFSPLLCDEDG
SGLVVQFDKNDIEEAGLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQGPLSIESIPLDDA
PTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINR
KHGRAEVSYPHPDYQHELLKPVLAPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGK
KKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPNVNVGGYKFTVDTDARVVYG
LGAIRGVGEGPIGAIVEAREADGPFKDIFDFCRRMDPKRMNKRTLEALIRSGALDTIGPN
RAVLFAAMEDALKAAAQNHTNQNLGMLDMFGDAFVEADDSDSNVYAEYINAREWTDRERL
SGEKDTLGLYLTGHPIDEYERELKRFVSTRISDLKPSRDPQRVAGLVVGVRTMKSKRGDT
MAFITLDDRTGRIEASLFGELFEQLRGQIEADQVLIVEGEVSSDEFSGGLRLRGKDVTPM
VTARIRYGQAVELALDAAQINGRLIETLRDSLTPYRDQEGLPVRLQYRHPAAVAWLELAD
EWKVAPSDDLLLALRDVQGQAGVQLRYR
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccgttcgttcatttacgtttgcacagtgaatactccctggtcgacggcctg
gttaagctcaaatcactggtcagcacaaccgctgagcgggcgatgccagcgctggccttg
actgatgagaccaacctgtttggtttggtcaagttttataaagccgcccagggggcgggg
ttgaagccgatcatcggcagcgatttatggctgcaaaacccccacgacgaatcgcacccc
tatcggctaacgctgctggccatgaatgacgttggctatcgcaaccttaccgagttgatc
tctaaaggctggacccatggccagcgccaggggcgggccattctcgataaacagtgggtg
ttagagcagagcgaagggctgatagcgctttccggtgcgcgggagggtgagattggccga
cacctgctctctgatcatgagcctgaagcacgccagttacttgaagagtggcaggcagcg
tttcccgaacgtttttatttagagctagtgcgcaccgggcgcccattggaagaggcctgc
gttcacgccagcgtcaagctggccattgagacaggcacaccggtggtggcgaccaacgac
gttcgctttttagagcgcgacgattactgggcccacgaaacccgcgtcgctatcggcgaa
ggtaaagcgctggatgacccacgtcgtgaacgccgctacaccgaagagcagtacctaaaa
agccctgacgagatggcggcgctgtttgcggatattcccgaagcgctggaaaacagcgtt
atgatcgccgagcgctgcagcgtgaacgtgcgtttgggtgagattttcctacccgaattc
gaaattcctgagggcatgacccaggatgagttcttccgcaaggtctctcacgatggcctg
acggatcgactcgattttcttttccctgctgagcgctatccccgcgacagcgacgagtac
aaggcgatcgaccagcgctaccgcgatcggctggagtttgagctcaacgttattatccag
atgggctttcctggctacttcctgatcgtaatggactttatccagtgggcaaaagataac
agcgtccctgtaggcccagggcgcggctcgggtgctggttcgctggtggcctatgcgcaa
aagatcaccgatctggatccaattggttacgatctgctgtttgagcgcttcctgaacccg
gaacgtgtctccatgcccgactttgacgtcgatttctgtatggagaaacgcgataaggtc
attgagtacgtggccgagcgttacggacgcaatgcggtatctcagatcgtgacgtttggc
accatggccgccaaggccgtggtgcgtgatgttgcccgcgctcaggggcggccctactct
cttggggataagctctccaagttgattccctttgaagtgggcatgaccctggccaaagcc
atcgagcaggaacccgcgctcaaagagtttatcggtaacgatgaagaagctgaggaaatc
tgggagatggccctcaagctcgagggcaccacccggggtaccggtaagcacgccgggggc
gtggtcattgcgccgaccaaactgacggacttctcgccgctgttgtgcgacgaagacggc
tcaggcttggtcgttcagttcgataaaaacgatatcgaagaggcggggctggtcaagttt
gacttcctgggcctacgcacgctgacgattatcgactgggcgctggagatggtcgataag
gtgcgcagcgttaacggtcagggaccgctcagtatcgagagcatcccactggacgacgcg
ccgacctttgaaatgctcaagcgcgccgaaaccaccgcggtgttccagcttgaatcccgc
ggcatgaaagagctgatcaagcgtctgctgcccgactcgctggacgatatgatcgccctg
gtggcgctgttccgccccggcccgctgcagtcgggcatggttgatgactttatcaatcgt
aagcacggccgagccgaagtctcttatccacacccggattaccaacacgaactgttgaag
ccggtgctggcgcctacctacggcatcattctttaccaagagcaggtcatgcagatcgct
caggtaatggcaggctatagcctcggccaagccgatatgttgcgccgggccatgggtaag
aaaaagcctgaagaaatggccaaacagcgcgacggctttatggaaggttgtgccgccaac
ggtatcgataaagacctcgccggtaacatctttgacttggtggaaaaattcgccggttac
ggttttaacaagtcgcactcggccgcctacgccttggtttcctatcaaacggcgtggcta
aaagcccactatccagggcctttcatggccgcggtgatgtccacagagatggacaacctg
gataaggtggtaccgctgattgaggagtgtcgcaacctcaaactcacggtgaccccaccg
aacgttaacgtcggtggctataaattcaccgtcgataccgatgcgcgggtggtttatggc
ctgggcgcgattcgtggcgtgggcgaaggaccgattggtgccattgttgaagcccgtgag
gcagacggtccgtttaaggatatcttcgacttctgtcgccgcatggatcccaaacggatg
aataagcgcaccctggaagcactgattcgctccggcgcgctggataccatcggtcccaac
cgcgcggtgctattcgctgccatggaagacgcgctgaaagccgccgcccagaaccatacc
aatcaaaacctgggtatgctggatatgttcggcgacgccttcgttgaagccgacgacagt
gatagcaacgtttacgccgaatatatcaacgcccgagagtggaccgatcgcgagcgcctc
tcgggggagaaagataccctggggctttatctgacggggcacccgattgatgagtacgag
cgcgaattaaagcgcttcgtgtctacgcgaatcagcgatttaaagccctcccgcgacccc
cagcgtgtggcaggtctcgtggtcggcgtgcgtaccatgaagtccaaacgcggcgatacc
atggcgtttattaccctggacgaccgcaccgggcgcattgaagcctcgctgtttggggag
ttattcgagcagttgcgcggtcagattgaggccgaccaagtgctcatcgtagagggcgag
gtttccagcgatgaattctctggcggcctgcgcctgcgcggtaaagacgtcacaccgatg
gtgacagcacgtattcgctacggccaagcggtggagctggcgctggacgccgcccaaatc
aatggtcgcttaattgaaaccctgcgcgacagcctgacgccgtatcgcgatcaagagggc
ttgccggtgcgcctacagtatcgacacccggcagctgtcgcgtggctggaacttgccgat
gagtggaaagtcgcgccaagcgacgatttactgctggcgctgcgggatgtgcagggccag
gcaggcgttcagctacgttatcgttaa
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