Vreelandella sp. SM1641: V8F66_02775
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Entry
V8F66_02775 CDS
T11229
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vrs Vreelandella sp. SM1641
Pathway
vrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V8F66_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vrs03019
]
V8F66_02775
03400 DNA repair and recombination proteins [BR:
vrs03400
]
V8F66_02775
Enzymes [BR:
vrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V8F66_02775
Messenger RNA biogenesis [BR:
vrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V8F66_02775
DNA repair and recombination proteins [BR:
vrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V8F66_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
TniB
Motif
Other DBs
NCBI-ProteinID:
XBY59426
UniProt:
A0AAU7XNB9
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All DBs
Position
581976..583991
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AA seq
671 aa
AA seq
DB search
MPPISPQQTLKEVFGFDDFRGGQQAVVSRVLAGHSTAAIFATGAGKSLCYQLPALHLPHL
TLVVSPLLALMQDQLAFLARHGVAAASIDSTQDRDTTRNVMERAKSGELKILMVSVERLK
NERFRHFLRQVQISLLVVDEAHCLSEWGHNFRPDYLKLPNYQRDFAIPQVLLLTATATPT
VIADMGEKFAIAADNVITTGFYRSNLELLVAPAMADRQQQLINWLKPQMQPGSEAPTIIY
VTLQQTAERVAKALAAQGIAAQAYHAGLDSSRRDEIQRQFMGGESPCIVATIAFGMGIDK
GDIRNVVHYDLPKSIENYSQEIGRAGRDGQPSTCLTMAGRDGLRVLENFVYGDTPEYAGI
YRLLEEIAAAGQAPDRQWEVLLNTLSRDTNIRPLPLKTLLVRLEMHGIIAPRFAFLAEYR
LRYHLDPSALVNYFEGERAAFVRLLVDNIPIARTWGTVDFDRLHQAGQTQQIDASRDRVI
TALEYFQDKGWLTLEGKRMTDVYEICQPNFTIEVLTSQLYDDCLNRERIEIERLQAMLAL
FESESCLTRRLAEHFGDSTFGKSPFDTPSNAEQGRCGHCSVCYGHPVKLPDAPPETPLTA
ADFQRYATPLIERHTEQFGQPPNAQRVAHFLCGLTMPVFTPLKARSLNGFAVFEQRAYPQ
VREWAARQINK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgccccctatatcaccgcagcaaacgctgaaagaggtatttggttttgacgactttcgt
ggcggccagcaggcggtggtgtccagggtgttggcggggcactccacggcggctattttc
gccaccggcgcgggaaagtcactttgctatcagcttcctgcactgcatttgccgcactta
accctggtggtatcgccgctgctggcgctgatgcaggatcagctcgcttttctggcccgc
cacggcgtggcagcggcgagtattgactctacccaagaccgcgacaccacccggaatgtc
atggagcgtgccaaaagcggcgagcttaaaatattgatggtctcggtggagcggctcaag
aacgagcgcttccgtcactttctacgccaggttcagatatcgctgctggtggtcgacgaa
gctcactgcctctctgaatgggggcataacttccggcccgattatttgaagctaccgaac
taccagcgcgactttgctatcccccaagtcctgctgctcactgccacggcaacgcccacc
gttattgccgatatgggcgagaaatttgccatcgcagcggacaacgtcatcactaccggt
ttttaccgttccaatctggagctgctggtggcgcctgccatggctgaccgccagcagcag
ttgatcaactggctgaagccgcagatgcagccgggtagcgaagcgccgacgattatttac
gtcaccctgcaacaaaccgccgagcgggtggctaaggcgctggcggcacaggggatcgca
gcccaggcctaccacgcagggttggattcaagccgacgggatgagattcagcgccagttt
atgggcggcgagtcgccctgcatcgtggccactattgcctttggcatgggtatcgataag
ggtgatatccgcaatgtggtgcactatgacttgcctaaatccatcgaaaactacagccag
gagattggccgggcagggcgcgacggccagccttccacctgcttgaccatggccgggcgg
gacggtctgagggtgctggaaaactttgtgtatggcgataccccagaatatgcgggcatt
tatcgcctattggaagagatcgcggcggcaggccaagcgccggatcgccagtgggaggtg
ctgctcaatacgctttcccgcgataccaatatccgcccgctgccgctaaaaacgctgttg
gtgcggctggagatgcacggcattatcgcgccgcgtttcgcatttctagctgagtaccgg
ctgcgctaccatctcgatcctagtgcattggtaaactattttgaaggcgaacgggcggcc
tttgtgcggcttttagtcgataatattcccatcgcacgcacctggggcacggtggatttt
gaccgcctgcaccaggcggggcagacgcagcagattgatgcctcccgcgacagagtgatc
actgcgcttgagtactttcaggataagggctggctgactctggaaggcaagcggatgacc
gacgtctacgagatctgccagccgaactttaccattgaggtgctgacgagccagctatac
gacgactgcctgaatcgagagcgaatagagattgaacgactgcaggccatgctggcgctg
tttgagtcggagagctgcctgactcggcggttagccgagcactttggcgatagtaccttt
ggtaaaagcccctttgatacaccatccaatgccgagcagggccgctgcgggcattgctcg
gtgtgttatggccacccggtaaaactaccggatgcgccgcccgagacaccgctaacggcg
gccgattttcagcgctacgccacgcctctgattgagcgccacaccgaacagttcggccag
ccgcccaatgcccagcgggtggcgcattttctgtgtggcttgaccatgccggtgtttacc
ccgctcaaagcccgcagccttaatggctttgctgtgttcgaacagcgcgcctatccccag
gtgcgtgagtgggctgcacgccagataaacaagtaa
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