Vreelandella sp. SM1641: V8F66_08045
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Entry
V8F66_08045 CDS
T11229
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vrs Vreelandella sp. SM1641
Pathway
vrs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vrs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
V8F66_08045 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vrs03019
]
V8F66_08045 (orn)
03009 Ribosome biogenesis [BR:
vrs03009
]
V8F66_08045 (orn)
Messenger RNA biogenesis [BR:
vrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V8F66_08045 (orn)
Ribosome biogenesis [BR:
vrs03009
]
Eukaryotic type
Pre-60S particles
RNases
V8F66_08045 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XBY60418
UniProt:
A0AAU7XUU1
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All DBs
Position
1743830..1744435
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AA seq
201 aa
AA seq
DB search
MSNATTAATEGKTTPRDDLLVWIDLEMTGLDPNKERIIEVATLITDADLNVVAEGPIIAV
KQPDSLLAQMDEWNQKTHGESGLVARVKASQVETAEAEQQTLAFLQQYAVAGSSPMCGNS
IHQDRRFLEREMPALLNFFHYRNLDVSTIKEVAKRWNPGALAGFSKQNVHLAMDDIKESI
AELAHYRSTFLRVEQSSDEEE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcaacgacggctgcaacggaaggaaaaacgacgccacgggatgatctgctg
gtgtggattgatctcgagatgaccggtctcgacccaaataaagagcggattattgaagta
gccacactcattacggatgcggatttgaatgtggtggcggaagggccaatcattgcggtg
aagcagccagacagcctgctggcgcaaatggatgagtggaaccagaaaacccacggcgaa
tcaggcttagtcgcacgggtaaaagccagccaggtggaaaccgctgaagctgagcagcaa
accctggcatttctgcagcagtacgcggtggcgggatcgtcgcccatgtgcggtaacagc
atccatcaggatcgccgttttctggagcgtgagatgcctgcgctgctcaattttttccac
taccgcaatctcgatgtgtctaccataaaagaggtggccaaacgctggaaccccggcgcg
ttggcgggctttagtaagcagaatgtgcacttggccatggacgatattaaagagtcgatt
gctgagctagcccactaccgcagtacgtttttgcgcgttgagcagagcagtgacgaagaa
gagtag
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