KEGG   Vreelandella sp. SM1641: V8F66_09935
Entry
V8F66_09935       CDS       T11229                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vrs  Vreelandella sp. SM1641
Pathway
vrs03030  DNA replication
vrs03430  Mismatch repair
vrs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V8F66_09935
   03430 Mismatch repair
    V8F66_09935
   03440 Homologous recombination
    V8F66_09935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vrs03032]
    V8F66_09935
   03400 DNA repair and recombination proteins [BR:vrs03400]
    V8F66_09935
Enzymes [BR:vrs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V8F66_09935
DNA replication proteins [BR:vrs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V8F66_09935
DNA repair and recombination proteins [BR:vrs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V8F66_09935
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 Rv2179c-like PAS_4 PAS_8
Other DBs
NCBI-ProteinID: XBY60767
UniProt: A0AAU7XVJ3
LinkDB
Position
complement(2146787..2148850)
AA seq 687 aa
MTRGGLPKRQRLIGLWLSLSGISLLGGAIFAAWLDAQLAPTGVTRMALWIGSFSGGATLF
LVGLVLERMLFTPLRHLQVQLARLVANPDARDEHPPEGWLKGLGPDLRRVRESWREDRSR
LATAHADGARSAARIRQELETLLQVLETPLLLCDYHRRVMLFNQAAEDFFEGNTGLGLGK
RLEALLPVASLQQALGQLPNDGSPRELLAPCDNRWLKVILRRVPGSDGETLLTFGDATAS
WSSEMGVRAELADMLTPLRQHTASLTSAADALIQLRHQNEASTSLLRQRFERVIHEEGIT
LGDNVAKIGQLLDDMQHQGERLTPMWSNDFWQALDERLDPEHRLITPVGMPAWFKGDAPA
LIALFDSLVKHLSTHLPESGFEGEICLGNKRVYLDLIWRGKAIPEHELAEWRQQPLSSLP
LTPSVADVLRQHASDIWSLTDDDGVHARLRLPLPAVERVGAPRETAPPRPEFHDFGIADL
PPPDEALASRSLRSLEVVAFDTETTGLELRRGDTVISLGACRVVNARLLASEAFDQKVDP
QRPIPAASTAIHGLTDADVIGAPPLDIVLTRFRDFVGEAVLLAHNAAFDLLAISHKGVAF
DIPVIDTLLISRALDEALDGHDLDSLAQRYDLAFPPGTRHTALGDARVTAELWLALLPRL
EARGVDTLEQLLALQANAFDRQDASAL
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgacccgaggtgggctgcccaaacgccagcgcctgattggcctatggctctcgctaagc
ggcatcagcttattgggcggggctatttttgccgcttggctggatgctcagctcgcgccc
acaggcgtcacccgcatggcgctatggataggcagcttttccggcggcgcgaccctattt
ttggtgggcttagtgcttgaacgcatgctgtttacaccgctgcgtcatttacaggttcag
ctggcacgtttggttgccaatcccgacgcccgtgacgaacacccacccgagggttggcta
aaagggctggggccagatttacgccgtgtgcgcgaaagctggcgcgaagatcgtagccgc
ctcgctactgcccacgccgacggcgcacgcagtgcggcgcgcattcgtcaggagctggaa
acactgctgcaggtactcgaaacgcccctgcttttatgtgactaccaccgtcgtgtgatg
ctgtttaaccaagcggcagaagacttctttgaaggtaatacagggttaggcctgggcaaa
cgacttgaagcgctgctccctgtggccagcttgcagcaagcactcggccaactgcctaac
gacggctccccgcgagagctgctcgccccctgcgataaccgctggctcaaagtgatactg
cgtcgcgtgccgggtagcgatggcgaaacattgctgacgtttggcgatgcaacggcgtcg
tggtcgagtgaaatgggggtaagagccgaattggccgatatgctgacccccctacgccag
cataccgccagtctcaccagcgccgccgatgcgctgatccaactccgccatcaaaacgaa
gccagcacgtcattgctgcgtcaacggtttgagcgcgtcattcatgaggaaggcatcacg
ttaggcgacaacgtggccaaaatcggccaactgctcgatgatatgcagcatcagggcgag
cgcttaacgccgatgtggtcgaacgatttctggcaagccctggatgaacgcctagatcca
gagcatcgcttaattaccccagtgggaatgcccgcttggtttaaaggcgatgcccccgcc
ctgattgcgctgttcgactctttagtgaagcacctcagtacccaccttcccgagagtggc
tttgaaggtgagatatgcctgggcaataagcgtgtctatttagatcttatctggcgcggc
aaagcgatccccgaacatgaattggcggagtggcgccagcaaccgctcagctcgctgccc
ctcacgcccagcgttgccgacgtgctacgccaacacgccagcgacatctggagtctgact
gacgatgatggggtgcatgcccgcctgcgccttccgctccccgccgttgaacgcgtcggt
gccccgcgggaaacggcaccaccacggcccgagtttcatgattttggcattgccgacctg
cctccgccggatgaagcgctggctagtcgttccttgcgcagcttggaggtcgtggcgttt
gataccgaaaccaccgggcttgagctgcgccgaggcgatacggtgatcagtctgggtgcc
tgtcgcgtggtcaacgcgcggctgttggctagcgaggccttcgatcaaaaagtcgatcct
cagcggcctattcctgccgccagcacggccattcacggccttaccgatgccgatgtcatt
ggcgccccaccgctggatatcgtgcttacccgctttcgtgactttgtaggcgaagccgta
ctgctggcccataacgccgcgtttgatctgctcgccatcagtcacaaaggtgtcgctttt
gatattcccgtcatcgacaccctgctgatttctcgggcgctggacgaagccttggacggg
catgacctggatagcctcgcccagcgctacgatctggcattccctcccggcacccgccac
actgccttaggtgatgctcgagtcaccgcagaactctggctagccctgctgccacgctta
gaggcccgcggcgtcgacaccctggaacagctgttagcgctgcaagccaatgcctttgac
cgacaggatgcgagtgccttatga

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