Vreelandella sp. SM1641: V8F66_13985
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Entry
V8F66_13985 CDS
T11229
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vrs Vreelandella sp. SM1641
Pathway
vrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V8F66_13985 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrs03400
]
V8F66_13985 (recB)
Enzymes [BR:
vrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V8F66_13985 (recB)
DNA repair and recombination proteins [BR:
vrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V8F66_13985 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XBY57410
UniProt:
A0AAU7XIK3
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All DBs
Position
3003920..3007843
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AA seq
1307 aa
AA seq
DB search
MSQPEPLNPLSLPLHGSRLIEASAGTGKTFTIALLYVRLVLGGHSVDDDTAFIRPLTPPE
ILVVTFTNAATQELRERIRNRLVEAADVFRETPDAKEAGHEEGLFPGPENVPDDSGIPAI
HGGQMAKVAPKDGFTAPSQWPASVPLAHDPLLLQLRDQYDPATWPACSRRLALAAEWMDE
AAVSTIHSWCYRMLREHAFDSGSLFSLNLENDQRELEQEVVRDYWRSFYYPLDSDALGIV
TRYWKSPDDLHVPLQRLLPESEALGGEKPQPSETLAATQAERTAQLSELKAPWPAWLDEL
VPALEDAATRKAFKGQSFNAKSRANWLGALREWCDTEADRPALTDAAWKRMTPDGMTDIW
KEGAPPCPQAWEALAQLPQALDALPEPRNDLLIHAVQWCRSRLEREQERRAEMGPNDLLT
HLDRALKGPNKEALAAQIQRQFPVALIDEFQDTDPIQYRIFNAVYDVATPRRDSAILLIG
DPKQAIYAFRGADIFTYLQARHDTDGRHVTLGTNFRSSRAMVAAVNHCFSYADQHDAGAF
LFRADDGDNPLPFNPVHAKGTKETLVLNGQPLPAMTLWPLESDDPLSKTAYQTEMAERCA
SHMAALLEAGRQQQAGFAKAADDSGDNGLTPLAPSDMAVLVNGLQEARAIRLALASRGIK
SVYLSDHDKVFSSPIAPQLAIWLRACAEPQANSRQAEAKLRAALATPVLGLSLEALDYLN
QSELAWEARVEQFSDYHRLWQRQGVLPLVRRLMVDFDIAARLLGEFAEGERLLTDLLHLG
EMLQHASQELDGEHALIRFLAEAIAAPDSHGDSHKLRLESDADLVKVVTIHKSKGLEYPL
VFLPFIANHRPVSDTDLPLRWHDSDGTLQLSLSADEATLATADRERLGEDLRKLYVALTR
ARHATWLGLAPLKGSENSAIGHLINGGKAIASSAFTQALGELVKGSDIDLSTAPEPTALR
FTPAPEQQALGHARTPLRPAREQWWIASYSALRTSGAVSETLPGAAQPTPTPEPTTPQEA
TTLEVLDEPHDNAINTEAFHLHRFPRGPGPGTFLHGLLEWAGQLGFNKALEDPAAREDML
RRRVQLRGWQAWHDTLAGWLEELLATPLPLPHSLSLAPSPSLTEPSEGSQVALCELESYQ
VELEFWFAAHQVQTRKLDELVSDHLLPGVSRPVLDADTLNGMLKGFIDLAFEHEGRFYVL
DWKSNYLGSDDSAYTADALRDAMLEKRYDLQAALYMLALHRLLKARLPDYDPHQHLGGSM
TVFLRGSRTTARGVHAVPAPVVLIEALDALFAGSSTASAASNQEALA
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcctgaaccactcaatccactaagcctaccgctccacggcagccgactgata
gaggcaagcgctggcaccggcaaaaccttcaccatcgctctgctctacgtgcgattggta
ctcggcgggcacagcgttgacgacgataccgcgtttatccgcccgctcacaccgccggaa
atcctggtcgtcaccttcaccaacgccgccacccaagagctacgcgaacggatacgcaat
cggctggtagaagcagcagacgtatttcgtgagactccagatgctaaggaagcaggtcac
gaagagggtctttttccagggccggaaaatgttcccgacgattccggcattcccgccatc
catggcggtcagatggcaaaagtagcgcccaaggacgggttcacagcgccctcgcagtgg
cctgcttccgtgccacttgctcatgatccattgctgctccagctccgcgaccaatacgac
cctgccacctggcccgcctgttcacggcgcctggcgctggccgcggaatggatggacgaa
gccgcggtttccaccatccacagctggtgctaccgcatgctgcgcgaacacgccttcgac
agtggcagcctgttctccctcaacctggaaaacgaccagcgcgaactggagcaggaagtg
gtgcgcgactactggcgcagcttctactacccgctggacagcgacgccctcggcattgtc
acccgctactggaaatcaccggacgaccttcacgttccgctacaacggctactgccagaa
agcgaagcgctgggcggcgaaaaaccccaacccagcgagaccctggccgccactcaggcc
gaacgcaccgcccagctcagcgaactcaaagccccctggcccgcctggctggacgaactg
gtgcccgccctggaagacgccgccacacgcaaagccttcaagggccaaagcttcaacgcc
aaaagccgcgccaactggctaggcgcactacgcgagtggtgcgacacggaggccgaccgc
cccgcgctcaccgacgccgcctggaaacgcatgacccccgacggcatgacggatatctgg
aaagagggcgcaccgccctgcccgcaagcctgggaagcgctggcccagctcccgcaagca
ctggacgccctgcccgagccacgcaacgacctgctgattcacgccgtgcagtggtgccgc
tcccggttagagcgcgaacaggaacgtcgcgccgagatgggccccaacgacctgctcacc
cacctggatcgcgccctcaaaggccccaacaaagaggccctggccgcgcagatccagcgc
cagttccccgtggcactgatcgatgagttccaggatacagacccgatccagtaccgcatc
ttcaacgccgtttatgacgtcgcaacgccccggcgcgacagcgccatcctactgattggc
gaccccaagcaggcgatctacgcctttcgcggcgcagatatcttcacctacctgcaggca
cggcacgacaccgatggccgccacgtcacgctgggcaccaacttccgctccagccgcgcc
atggtggcggcggtcaatcactgcttcagctacgccgaccagcatgatgccggtgccttt
ctgttccgtgccgatgacggcgacaacccgctgccgttcaatcccgtccacgccaaaggc
accaaggaaacgctggtacttaacggccaaccgctacccgcaatgaccctgtggccgctg
gaaagtgacgacccgctctccaaaaccgcctaccaaaccgagatggccgagcgctgcgcc
tcccacatggccgcacttctggaagcaggccgccaacagcaggcgggctttgctaaggcg
gctgatgacagcggtgataacggactcactccgctggccccctcggacatggccgtgctg
gtcaacggcctgcaggaagcgcgggcgattcggctggcgctggccagccgaggcatcaag
agcgtctacctttccgatcacgacaaggtgttcagctcccccattgccccgcagctggcc
atttggctgcgcgcctgcgccgagccccaggccaactcccgccaagcggaagccaagctg
cgcgccgccctggcaacgccggtgcttgggctgagccttgaagcactcgattacctcaac
cagagcgagctagcttgggaagcgcgggtcgagcagttcagcgactaccaccgcctgtgg
cagcgccagggcgtgctgccgctggtgcgccgtttgatggttgattttgatatcgccgca
cggctgttgggcgagttcgccgagggtgagcgtttgctaaccgacctgctccacctaggt
gaaatgctgcagcacgccagccaggagctggatggcgaacacgcgctgattcgctttctg
gccgaagccatcgccgccccggatagccacggcgacagccacaaactgcgcctggagagc
gacgccgatctggtcaaggtagtgaccattcacaaatccaaggggctggagtacccgctg
gtcttcctgccgtttatcgccaaccaccgcccggtcagcgacaccgacctgccgctacgc
tggcacgatagcgacggcacgctgcaactcagcttaagcgccgatgaagccacgctggcc
accgccgaccgcgaacgcctcggcgaagacctgcgtaagctttacgtcgcgctcacccgc
gcccgccacgccacctggctggggctggcgccgctgaaaggcagcgagaacagcgccatc
ggccacttgatcaacggcggcaaagccattgcctccagcgcgtttacccaagccctgggc
gaactggtgaaaggcagcgatatcgatttaagtaccgccccggaacccaccgcgctgcgc
ttcaccccggcgccggaacagcaggcactgggccacgcccgcaccccgctgcgccccgcc
cgtgaacagtggtggatcgccagctactcggcgctgcgcacctcaggggccgtttcagaa
acgctgccaggggcggcgcagccaacgcccacaccggaacccaccacgccccaggaagcc
accaccctggaagtgttggatgaaccccacgacaacgccatcaacaccgaagcgtttcac
ctgcaccggtttccgcgaggcccaggccccggcaccttcctacatggattgctggagtgg
gcgggccaactgggcttcaacaaagcgctagaagaccccgccgcccgggaagacatgctg
aggcggcgcgtgcagctgcgcggctggcaggcatggcacgataccctggcaggctggctg
gaagaactgctcgccacgccgcttcccctgcctcactctctttcactggccccgtccccg
tccctgacagagcccagcgaaggtagccaagtggcgctatgcgaactagaaagctatcag
gtggaactggagttctggtttgccgcgcaccaggtacaaacgcgcaagctggatgagctg
gtcagtgaccacttactgccaggggtatcgcgccccgtactggatgccgacaccctcaac
ggcatgctcaagggctttatcgacctcgcctttgaacatgaaggccgcttctacgtgctc
gactggaaatccaactatctgggcagcgacgacagcgcctacaccgctgacgccctgcgc
gatgccatgctcgaaaaacgctacgacctgcaagcggcgctgtatatgctcgcccttcac
cggctgctgaaagcgcgccttcccgactacgacccgcaccaacacctgggcggttcgatg
acggtattcttgcgcggcagccgcaccaccgcccgcggcgtgcacgccgtgcctgcaccg
gtcgtgctgatcgaagcgctggatgcactctttgcaggctcatcaacagcgtcagcagca
agcaaccaggaggcactggcatga
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