KEGG   Vreelandella sp. SM1641: V8F66_15605
Entry
V8F66_15605       CDS       T11229                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vrs  Vreelandella sp. SM1641
Pathway
vrs03030  DNA replication
vrs03430  Mismatch repair
vrs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V8F66_15605
   03430 Mismatch repair
    V8F66_15605
   03440 Homologous recombination
    V8F66_15605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vrs03032]
    V8F66_15605
   03400 DNA repair and recombination proteins [BR:vrs03400]
    V8F66_15605
Enzymes [BR:vrs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V8F66_15605
DNA replication proteins [BR:vrs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V8F66_15605
DNA repair and recombination proteins [BR:vrs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V8F66_15605
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: XBY57706
UniProt: A0AAU7XIQ3
LinkDB
Position
complement(3352409..3353134)
AA seq 241 aa
MFGIRPRQKITQADWAGYMAQRAQQAASSAIQQFFSTPLPDPETPIAEVPMVALDMETTG
LDERRHAIVSIGLVPFTLNRIKLAERRYWVVNPSRPLAEASIAYHHITHSEIAQAPDLEV
ILDEVLAALAGRLVVVHFRNIERPFLDAAIKARRGEGVLFPMIDTMSLEARLHRQTLWAR
FRRWLGRPPVSIRLHASRERYGLPAYQGHHALVDALATAELLQAQIATHYRPHTPLKDIW
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtttggaatacgaccacgtcagaaaatcactcaggctgactgggctggctatatggcc
cagcgggctcagcaagccgccagttcggcgatccaacagttttttagtaccccgctgcct
gatccggaaaccccgattgccgaggtgcccatggtggcacttgatatggaaaccaccggg
ctggatgagcggcgccatgccattgtcagtattggtcttgtgccgtttacccttaatcgc
attaagcttgccgagcggcgctactgggtggtgaatccttcgcggccgctggcggaagcc
tcgattgcctatcatcacattacccactcggagattgcccaggcgccagatttagaagtg
atattggatgaggtgttagcggcgttagcgggtcgattagtcgtcgttcacttccgcaat
atcgagcggccttttttagatgccgctatcaaagctcgccgtggggaaggggtgctgttt
ccgatgatcgataccatgtcgctggaggcgcggctccatcgccaaacgctttgggcgcgc
tttcgtcgctggttgggtcgcccaccggtttcgatacggttgcacgctagccgcgaacgc
tatggtttgcccgcttatcaaggacatcatgccctggtggatgcgttggccaccgcagag
ctattgcaggcgcaaattgctacccattaccggccccacacacccttaaaagacatttgg
tgttaa

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