Vibrio ruber: RND59_00010
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Entry
RND59_00010 CDS
T09542
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vru
Vibrio ruber
Pathway
vru00061
Fatty acid biosynthesis
vru00071
Fatty acid degradation
vru01100
Metabolic pathways
vru01212
Fatty acid metabolism
vru02024
Quorum sensing
vru04146
Peroxisome
Module
vru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RND59_00010 (fadD)
00071 Fatty acid degradation
RND59_00010 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RND59_00010 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RND59_00010 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vru01004
]
RND59_00010 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vru04147
]
RND59_00010 (fadD)
Enzymes [BR:
vru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RND59_00010 (fadD)
Lipid biosynthesis proteins [BR:
vru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RND59_00010 (fadD)
Exosome [BR:
vru04147
]
Exosomal proteins
Exosomal proteins of breast milk
RND59_00010 (fadD)
Exosomal proteins of breast cancer cells
RND59_00010 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WNJ95544
LinkDB
All DBs
Position
1:complement(839..2533)
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AA seq
564 aa
AA seq
DB search
MEHPWLARYPNDVPETINPDVYSSLVEMFEQSITKYADQPAFVNMGTVMTFRKLEERSRA
FAAYLQNELQLKKGDRVALMMPNLLQYPVALFGVLRAGLVAVNVNPLYTPRELEHQLNDA
GVTTIVIVSNFAGTLQKIVQRTSVQHVILTSLGQMLPRAKGTVVDFVVKYVKRLVPHYHL
PDAISMRTALKLGRRMQYVKPVIEGDDTAFLQYTGGTTGIAKGAILSHRNMVANVLQAKA
AYGPVLTEGRELVVTALPLYHVFALSVNCLLFIELGGQNLLITNPRDIPGFVKELQRYPV
TAITGVNTLFNALVHNESFRNMDFSRLHLSVGGGTAVQRAVANEWKKVTGLHLLEGYGLT
ECSPLVAGNPYDLSDYSGAIGLPVPSTDVRIVDENGQVVGFDQSGELQVRGPQVMTGYWQ
REDATREVLTDDGWLSTGDIVRMDEQGMLYIVDRKKDMILVSGFNVYPNEIEDVVSMHDK
VLEAAAIGQPHDVSGEVVKLFVVKKDTSLTKEEIIAHCRQYLTGYKIPKLIEFRDELPKT
NVGKILRRALKDENHQVMLGMEQG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggagcatccatggcttgcacgttacccaaatgatgtgcctgaaacgattaatccagat
gtttattcatctctggttgagatgtttgaacaatcgatcacgaaatacgctgatcagcct
gcttttgtcaatatgggaacggtgatgaccttccgtaagctggaagagcgcagtcgtgct
tttgccgcttatttacaaaacgagttacaactcaaaaaaggtgatcgcgttgccttaatg
atgccaaatttgctgcaatacccggtggcattgtttggtgtgctacgggctggtttagtg
gccgttaatgtcaatcccctgtacacaccccgagagctggaacatcagctcaatgatgcg
ggggtcaccacgattgtgatcgtctcgaattttgccggaaccttgcagaaaattgtacaa
cggacatcggtacaacatgtcattctgacgagtctggggcagatgttgccacgcgcgaaa
ggaaccgtggtggactttgtcgtcaaatatgtcaaacgactcgtaccacactaccattta
ccggatgcaatctcgatgcgaaccgctttaaaactcggtcgtcggatgcagtatgtcaag
ccagttatcgaaggtgatgataccgcatttttacagtataccggtggcacgacaggcatt
gccaaaggtgcgatcctttctcaccgcaacatggttgccaacgtcttacaggcgaaagcg
gcttatgggccggttttaaccgaagggcgagagctggtggtgaccgcgttgcctttgtat
catgtgtttgcattaagtgtgaactgtctgctgtttattgaattgggcggacaaaacctg
ctgatcactaatccgagagatatccctggatttgtcaaagagttacaacgctatcctgta
acagcaatcactggagtgaatacgctgtttaatgccttggttcacaatgaatcgttccgt
aatatggacttttcccgcctgcatttgtctgtcggtgggggaactgccgtacaacgggcg
gttgccaatgaatggaaaaaagtaaccggcttacatttgctcgaaggttatggtttgact
gaatgttctcctttagttgcaggcaacccctatgatctgagtgattacagtggcgcgatc
ggtctgccggtgccatcgaccgatgtgcggattgttgatgagaatggtcaagtcgtcggg
tttgatcagagcggtgagttacaggttcgcggaccacaggtgatgaccggatactggcag
cgtgaagatgccacccgagaagtcttaactgatgatggttggttatcgaccggtgatatt
gttcggatggatgagcaaggtatgctatatatcgtggatcggaaaaaagatatgattctg
gtttccggttttaatgtgtatccgaatgaaattgaagatgttgtctctatgcatgataaa
gtgctggaagctgccgcgatcggacaaccacatgatgtgagtggtgaagtggttaaactg
tttgtcgttaaaaaagatacatcactgacaaaagaagaaatcattgctcactgtcgccaa
tatctgaccggatataagatcccgaaactgatagaattccgtgacgagctgccgaaaacc
aatgtcggtaaaatattacgccgggcattgaaagatgaaaatcatcaggtaatgctgggt
atggaacagggctag
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