Vibrio ruber: RND59_00285
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Entry
RND59_00285 CDS
T09542
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
vru
Vibrio ruber
Pathway
vru00910
Nitrogen metabolism
vru01100
Metabolic pathways
vru01120
Microbial metabolism in diverse environments
vru01310
Nitrogen cycle
Module
vru_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RND59_00285 (nirB)
Enzymes [BR:
vru01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
RND59_00285 (nirB)
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GFIT
Motif
Pfam:
Pyr_redox_2
Fer2_BFD
NIR_SIR
Pyr_redox
NIR_SIR_ferr
Pyr_redox_3
Rubredoxin_C
FAD_binding_2
AlaDh_PNT_C
NAD_binding_9
GIDA
FAD_binding_3
HEM4
Motif
Other DBs
NCBI-ProteinID:
WNJ95594
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Position
1:complement(61468..64032)
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AA seq
854 aa
AA seq
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MQQKSKLVVIGNGMVGHRFIEDLMRRDGTNHIEMTVLSEEPRLAYDRVHLSSYFENNNAD
ALTLVSPGFYREHQIQVLLGDRAVRIDCEKQFVVAASGEQIAFDKLILATGSYPWVPPIP
GADNPDCFVYRTIDDLDAIKACADHSKKGAVIGGGLLGLEAAGALRALGVETHVVEFAPV
LMAEQLDKQGGELLRQKIESIGVQVHTSKNTLEIVDSGTSARHTLNFADGTALEVDFIVF
STGIRPQDSVAKAAGLAIAPRGGVVINDHCQTSNPNIYAIGECASWQGHFFGLVAPGYKM
ATIAVDHLLGERSQFEGADMSAKLKLLGVDVGSIGDANGQTPGSKSYVYLNEAEGIYKRV
IVSQDEKHLLGAVLVGDTADYGHLLQLKLNRIELPEHPDSLILPAYAGAEKPALGADALP
DSAVLCSCFDVTKGQIITAISEGKHTLAEVKAATNAGNGCGGCLPLISSVLNAELAKAGI
AVSHHLCEHFAYSRQELFHIIRTHGIKSFEQLIETYGHGYGCEICKPTVGSILASCWGEH
ILNPQRVGLHDTNDNFLGNMQKDGTYSVIPRMAGGEVTPAALHALATVAQQYGLYTKITG
AQRIALFGAQKDDLPAIWRQLIAAGFETGQAYAKALRMVKSCVGSTWCRFGVKDSLGLGV
RIENRYKGIRTPHKMKMGVSGCTRECAEAQGKDLGIIATDSGWNMYICGNGGMKPRHADL
FAAGLDEPTLFKYIDRFMMFYIRTADKQQRTSVWLENLDGGIEYLQAVIIDDKLGLNQQL
EADMARLIENYRCEWQQTLDEPELLPRFSHFVNSDLRDDNIQFVSQRQQHRPATYLEKHP
HIKGEILHIEREVE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaaagagcaaactggtggtcattggtaatgggatggtggggcatcgatttatt
gaagacctgatgcgcagagatggtacgaatcacatcgagatgacggttctgagtgaagaa
ccccgccttgcttatgaccgtgtccatctgtcttcttactttgaaaataacaatgcagat
gcattaacgttagtttctccgggtttttatcgtgaacatcaaattcaggtattgctcgga
gatcgggccgtcaggattgattgtgaaaagcaatttgtagtggctgcaagtggggaacag
attgcttttgacaagttaattcttgcgaccgggtcatatccttgggttccccccattccg
ggtgccgataaccccgattgttttgtgtatcggacaatcgacgatctcgatgcgatcaaa
gcgtgtgcagaccacagtaagaaaggtgctgtgattggcggaggattgcttggcctcgaa
gctgcgggagccttaagagcgttgggtgttgaaacccacgtggttgagtttgcaccggta
ttaatggcggaacagctggataaacaaggcggtgaactccttcgccagaaaatagaaagt
atcggcgttcaggtgcataccagtaagaataccctcgaaattgtcgattcaggcacctca
gcccgtcatacactcaattttgcagacggcacggcactggaggttgattttattgtcttt
tcaaccggtatcaggccgcaagacagtgtggcgaaagcagccgggctggcaattgcacca
cgcggtggcgtggtgattaatgatcattgtcagacctcaaaccccaatatttacgcgatt
ggtgaatgtgcctcatggcaagggcatttcttcgggctcgttgcgccgggttataaaatg
gcgaccatcgcggttgaccacttactgggagagcgtagtcagtttgaaggtgccgatatg
agtgccaaattgaagttgttgggggtcgatgttggcagtatcggggatgcaaacggtcag
acaccgggcagcaaaagttatgtgtatctcaatgaagctgaggggatttataagcgcgtc
attgtgtcacaggatgagaaacacttacttggggctgtactcgtcggtgataccgcggat
tatggtcatctgttacaactcaaactgaatcgtatcgaactgcctgaacatccggatagc
ctgattcttcctgcttacgcgggagccgaaaagcccgccctcggtgcggatgcgttacct
gattcggcggtgctgtgttcatgttttgatgtgaccaaagggcagatcatcaccgcaatt
agtgagggtaaacatacactggctgaagtgaaggctgcgaccaatgccggcaacggctgt
ggcggctgtctccccctgatcagctctgtgctcaatgctgaactggcaaaagcgggcatc
gcggtcagtcatcatctgtgtgaacattttgcctactcgcggcaggagctgttccacatc
atcagaacacacggcatcaaaagctttgagcaattaatcgagacatacggtcatggttat
ggctgtgaaatttgtaagccgacagtcggttcgattctcgcgtcttgctggggggagcat
attttaaatcctcagcgagtcggactacatgataccaacgacaacttcctcggcaatatg
caaaaagacggcacatattccgtcattccgagaatggcgggaggagaggtgacaccggcg
gcattacacgcgttagcaacggtggcacaacagtatgggctctacaccaaaattaccgga
gcacaacgcattgcattatttggtgcgcagaaagatgacctgccggcaatatggcgacaa
ctgatcgctgcagggtttgaaaccggtcaggcttatgccaaagcgttgcgaatggtgaaa
agctgcgtcgggagcacttggtgccgcttcggggtgaaagatagccttggactcggagta
cggattgaaaatcgttataaagggattcggacaccccataagatgaaaatgggggtttcc
gggtgtacccgggagtgtgcggaagcgcagggaaaagatctcgggattattgccaccgat
tccggctggaatatgtacatctgtgggaatgggggaatgaagccgagacacgctgatttg
ttcgcggccggtttagatgagccaaccttattcaaatatattgaccgctttatgatgttt
tatattcggactgcggacaaacaacagcgcacatccgtctggctggagaatcttgatggc
ggtatcgaatatctgcaagcggtgattattgatgacaagttggggctcaaccaacaactc
gaagctgacatggccagactgattgaaaattatcggtgtgaatggcaacaaacgctggat
gagcctgagttgttaccacgattctcccatttcgtgaatagcgatttacgggatgacaat
atccagtttgtctcgcaacgtcagcaacatcgtcctgcgacttatctggagaagcatccg
cacattaaaggtgaaattttacatattgaacgggaggttgagtga
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